RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SIGLEC11Q96RL6 698 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 SLC22A12Q96S37 553 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF347Q96SE7 839 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 TM6SF2Q9BZW4 377 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 PARVBQ9HBI1 364 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 TM9SF3Q9HD45 589 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 IL1RAPQ9NPH3 570 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 AKIP1Q9NQ31 210 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 THG1LQ9NWX6 298 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 CRLS1Q9UJA2 301 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 BAG5Q9UL15 447 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 SNX6Q9UNH7 406 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 SAMD4AQ9UPU9 718 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 TDRKHQ9Y2W6 561 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 COQ6Q9Y2Z9 468 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 SH3GLB1Q9Y371 365 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 YIPF1Q9Y548 306 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 SNX5Q9Y5X3 404 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 OBSL1O75147 1896 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 NPIPB15A6NHN6 443 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 GFYI3L273 518 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 J3QRK9 145 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 AXIN1O15169 862 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 MITFO75030 526 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 E2F6O75461 281 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 JRKO75564 520 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 KCNK5O95279 499 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 B3GALT4O96024 378 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 GSNP06396 782 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 OCM2P0CE71 109 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 OCMP0CE72 109 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 MYCLP1P12525 358 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 PORP16435 677 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 AMD1P17707 334 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 GPX2P18283 190 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 IGFBP5P24593 272 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 GKP32189 559 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 IDUAP35475 653 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 OPRL1P41146 370 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 CLK3P49761 638 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 DAPP51397 102 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 BCAP31P51572 246 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 MAPK10P53779 464 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 TPD52P55327 224 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 WNT3P56703 355 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 RELBQ01201 579 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 RELAQ04206 551 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 PCDH1Q08174 1060 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 SLC14A1Q13336 389 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 SP140Q13342 867 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 CDH18Q13634 790 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 ARHGEF7Q14155 803 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF846Q147U1 533 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 NR1D2Q14995 579 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 CPSF6Q16630 551 aaKnown RBP eCLIP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 DUOXA1Q1HG43 343 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 VMACQ2NL98 169 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 IQCCQ4KMZ1 466 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 DGKKQ5KSL6 1271 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 MPP7Q5T2T1 576 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 LAIR1Q6GTX8 287 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 OR2T5Q6IEZ7 315 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 PDE12Q6L8Q7 609 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 NIPAL1Q6NVV3 410 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 NEK5Q6P3R8 708 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 ERICH5Q6P6B1 374 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 C16orf87Q6PH81 154 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 TPRG1Q6ZUI0 275 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 CEP68Q76N32 757 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 PIWIL3Q7Z3Z3 882 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF438Q7Z4V0 828 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 DNAJB7Q7Z6W7 309 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 B3GNT8Q7Z7M8 397 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 TSPAN33Q86UF1 283 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 IGFN1Q86VF2 1251 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 PTOV1Q86YD1 416 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 ZDHHC21Q8IVQ6 265 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 ZZZ3Q8IYH5 903 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 CPXM2Q8N436 756 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 SETD9Q8NE22 299 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 OR6K2Q8NGY2 324 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 OR2T29Q8NH02 315 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 RAET1EQ8TD07 263 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 SNRNP27Q8WVK2 155 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 SELENOMQ8WWX9 145 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 NCLNQ969V3 563 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 FBXL8Q96CD0 374 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 C11orf24Q96F05 449 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 SCRN2Q96FV2 425 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 APIPQ96GX9 242 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 IGSF21Q96ID5 467 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 HSH2DQ96JZ2 352 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 MAGEB10Q96LZ2 347 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 CCDC138Q96M89 665 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 MCCC1Q96RQ3 725 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 PITX2Q99697 317 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 BARD1Q99728 777 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 ATP13A3Q9H7F0 1226 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 NECTIN3Q9NQS3 549 aa5.04□□□□□ -1.6
ATPAF1-212ENST00000542495 STARD7Q9NQZ5 370 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms