RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 ZNF490Q9ULM2 529 aaPredicted RBP8.39□□□□□ -1.07
THBS3-210ENST00000541576 CCL27Q9Y4X3 112 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 ARHGEF17Q96PE2 2063 aaPredicted RBP8.39□□□□□ -1.07
THBS3-210ENST00000541576 RGS14O43566 566 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 ERGP11308 486 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 JUPP14923 745 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 NPPBP16860 134 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 PRDX6P30041 224 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 DIO3P55073 304 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 STX1BP61266 288 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 ILF3Q12906 894 aaKnown RBP eCLIP8.39□□□□□ -1.07
THBS3-210ENST00000541576 DOC2AQ14183 400 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 NR6A1Q15406 480 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 OGFOD2Q6N063 350 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 ABRAXAS1Q6UWZ7 409 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 WASH2PQ6VEQ5 465 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 RGL4Q8IZJ4 473 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 C2orf73Q8N5S3 287 aaPredicted RBP8.39□□□□□ -1.07
THBS3-210ENST00000541576 OR9I1Q8NGQ6 314 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 SELENOMQ8WWX9 145 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 NEIL2Q969S2 332 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 SLC45A3Q96JT2 553 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 WASH6PQ9NQA3 447 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 SCHIP1Q9P0W5 487 aaPredicted RBP8.39□□□□□ -1.07
THBS3-210ENST00000541576 RBMX2Q9Y388 322 aaKnown RBP8.39□□□□□ -1.07
THBS3-210ENST00000541576 HEBP2Q9Y5Z4 205 aa8.39□□□□□ -1.07
THBS3-210ENST00000541576 MUC3AQ02505 3323 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 H3BSA7 217 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 SLC28A1O00337 649 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 PDGFBP01127 241 aaPredicted RBP8.38□□□□□ -1.07
THBS3-210ENST00000541576 MTHFD1P11586 935 aaKnown RBP8.38□□□□□ -1.07
THBS3-210ENST00000541576 CD22P20273 847 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 HNF4AP41235 474 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 ATP4BP51164 291 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 NEK2P51955 445 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 NME5P56597 212 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 FOLH1Q04609 750 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 PCDH1Q08174 1060 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 SIGLEC14Q08ET2 396 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 EIF2B5Q13144 721 aaKnown RBP8.38□□□□□ -1.07
THBS3-210ENST00000541576 FZD2Q14332 565 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 C16orf72Q14CZ0 275 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 CYP2A13Q16696 494 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 KIF19Q2TAC6 998 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 C6orf136Q5SQH8 315 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 PRAMEF14Q5SWL7 426 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 PRAMEF13Q5VWM6 474 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 SLC36A4Q6YBV0 504 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 GK5Q6ZS86 529 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 TRIM46Q7Z4K8 759 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 SPATA19Q7Z5L4 167 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 AMIGO2Q86SJ2 522 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 TMPRSS11BQ86T26 416 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 FNDC5Q8NAU1 212 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 SETD7Q8WTS6 366 aaKnown RBP8.38□□□□□ -1.07
THBS3-210ENST00000541576 MTFMTQ96DP5 389 aaKnown RBP8.38□□□□□ -1.07
THBS3-210ENST00000541576 CAMK1GQ96NX5 476 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 MENTQ9BUN1 341 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 PCM1Q15154 2024 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 TECTAO75443 2155 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 SPAG17Q6Q759 2223 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 PSMD12O00232 456 aaPredicted RBP8.38□□□□□ -1.07
THBS3-210ENST00000541576 EML2O95834 649 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 THRAP10827 490 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 IDO1P14902 403 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 GPX3P22352 226 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 STT3AP46977 705 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 RAB28P51157 221 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 ERVK-8P63133 956 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 HPCAP84074 193 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 HMGCS1Q01581 520 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 NRF1Q16656 503 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 IMPG1Q17R60 797 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 AGKQ53H12 422 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 ZNF542PQ5EBM4 170 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 FRG2Q64ET8 278 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 GRHL2Q6ISB3 625 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 MAMSTRQ6ZN01 415 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 SLCO4C1Q6ZQN7 724 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 DHDDSQ86SQ9 333 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 PARGQ86W56 976 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 DCP2Q8IU60 420 aaKnown RBP8.38□□□□□ -1.07
THBS3-210ENST00000541576 FUNDC1Q8IVP5 155 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 PHACTR4Q8IZ21 702 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 DEFB107AQ8IZN7 70 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 MFSD2AQ8NA29 543 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 RP9Q8TA86 221 aaKnown RBP8.38□□□□□ -1.07
THBS3-210ENST00000541576 SLC5A11Q8WWX8 675 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 SMPDL3AQ92484 453 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 SH3KBP1Q96B97 665 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 PPP3R2Q96LZ3 170 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 HSPA12BQ96MM6 686 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 NECAB3Q96P71 396 aaPredicted RBP8.38□□□□□ -1.07
THBS3-210ENST00000541576 FRG2BQ96QU4 278 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 NR1H4Q96RI1 486 aaPredicted RBP8.38□□□□□ -1.07
THBS3-210ENST00000541576 HAUS8Q9BT25 410 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 MIR1-1HGQ9H1L0 117 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 ARMC7Q9H6L4 198 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 SPATA6Q9NWH7 488 aaPredicted RBP8.38□□□□□ -1.07
THBS3-210ENST00000541576 CCDC167Q9P0B6 97 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms