RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SLC22A3O75751 556 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 C1GALT1C1LP0DN25 315 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 NDUFS1P28331 727 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 RPL38P63173 70 aaKnown RBP16.3■□□□□ 0.2
COPS3-212ENST00000539941 HMGCS1Q01581 520 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 SIGLEC14Q08ET2 396 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 PRKG2Q13237 762 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 CLCA4Q14CN2 919 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 MMEL1Q495T6 779 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 RFTN2Q52LD8 501 aaPredicted RBP16.3■□□□□ 0.2
COPS3-212ENST00000539941 IL23RQ5VWK5 629 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 REP15Q6BDI9 236 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 TMPRSS11BQ86T26 416 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 ULK2Q8IYT8 1036 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 PCYOX1LQ8NBM8 494 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 UBE2E3Q969T4 207 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 CAMK1GQ96NX5 476 aa16.3■□□□□ 0.2
COPS3-212ENST00000539941 IMP3Q9NV31 184 aaKnown RBP16.3■□□□□ 0.2
COPS3-212ENST00000539941 FAM234BA2RU67 622 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 PFDN1O60925 122 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 SEC22BO75396 215 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 PABPC4LP0CB38 370 aaKnown RBP16.29■□□□□ 0.2
COPS3-212ENST00000539941 MTHFD1P11586 935 aaKnown RBP16.29■□□□□ 0.2
COPS3-212ENST00000539941 MAPK1P28482 360 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 RAB28P51157 221 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 TSTA3Q13630 321 aaPredicted RBP16.29■□□□□ 0.2
COPS3-212ENST00000539941 RCAN2Q14206 197 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 RPE65Q16518 533 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 HIST2H2ACQ16777 129 aaPredicted RBP16.29■□□□□ 0.2
COPS3-212ENST00000539941 ALG11Q2TAA5 492 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 CACHD1Q5VU97 1274 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 HIST2H2AA3Q6FI13 130 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 MED27Q6P2C8 311 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 CYP20A1Q6UW02 462 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 NXPE4Q6UWF7 544 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 LAS2Q8IYD9 372 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 OR13H1Q8NG92 308 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 TSACCQ96A04 125 aaPredicted RBP16.29■□□□□ 0.2
COPS3-212ENST00000539941 ROPN1LQ96C74 230 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 MTFMTQ96DP5 389 aaKnown RBP16.29■□□□□ 0.2
COPS3-212ENST00000539941 IL17FQ96PD4 163 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 TPSD1Q9BZJ3 242 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 PLAGL1Q9UM63 463 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 TSC22D4Q9Y3Q8 395 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 POLR3HQ9Y535 204 aaPredicted RBP16.29■□□□□ 0.2
COPS3-212ENST00000539941 COLEC10Q9Y6Z7 277 aa16.29■□□□□ 0.2
COPS3-212ENST00000539941 LRP4O75096 1905 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 A0A088AWK7 358 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 NR5A2O00482 541 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 FBP2O00757 339 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 NDUFS2O75306 463 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 CIB2O75838 187 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 LYNP07948 512 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 PIM1P11309 404 aaPredicted RBP16.28■□□□□ 0.2
COPS3-212ENST00000539941 G6PDP11413 515 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 JAK1P23458 1154 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 PSMD7P51665 324 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 NEK2P51955 445 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 KCNK10P57789 538 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 TBL3Q12788 808 aaKnown RBP16.28■□□□□ 0.2
COPS3-212ENST00000539941 KRT33BQ14525 404 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 C6orf163Q5TEZ5 329 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 DUS1LQ6P1R4 473 aaKnown RBP16.28■□□□□ 0.2
COPS3-212ENST00000539941 PGM2L1Q6PCE3 622 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 SUSD1Q6UWL2 747 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 CADM4Q8NFZ8 388 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 SERPINI1Q99574 410 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 NPAS2Q99743 824 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 KIR3DX1Q9H7L2 352 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 WDR41Q9HAD4 459 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 PELI2Q9HAT8 420 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 PRDM8Q9NQV8 689 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 SPATA6Q9NWH7 488 aaPredicted RBP16.28■□□□□ 0.2
COPS3-212ENST00000539941 HCN4Q9Y3Q4 1203 aa16.28■□□□□ 0.2
COPS3-212ENST00000539941 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.28■□□□□ 0.2
COPS3-212ENST00000539941 EIF4E1BA6NMX2 242 aaKnown RBP16.27■□□□□ 0.2
COPS3-212ENST00000539941 MRASO14807 208 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 ANKRD28O15084 1053 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 ANGPT2O15123 496 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 PSMG1O95456 288 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 TNFP01375 233 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 PRPS2P11908 318 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 VARSP26640 1264 aaKnown RBP16.27■□□□□ 0.2
COPS3-212ENST00000539941 PKLRP30613 574 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 NME5P56597 212 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 UFM1P61960 85 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 KIAA0040Q15053 153 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 RCN1Q15293 331 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 RD3Q7Z3Z2 195 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 NET1Q7Z628 596 aaPredicted RBP16.27■□□□□ 0.2
COPS3-212ENST00000539941 C17orf64Q86WR6 236 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 DCP2Q8IU60 420 aaKnown RBP16.27■□□□□ 0.2
COPS3-212ENST00000539941 GLB1L3Q8NCI6 653 aaPredicted RBP16.27■□□□□ 0.2
COPS3-212ENST00000539941 OR7G3Q8NG95 312 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 OR2L8Q8NGY9 312 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 PROKR1Q8TCW9 393 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 FCRL1Q96LA6 429 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 ORAI3Q9BRQ5 295 aa16.27■□□□□ 0.2
COPS3-212ENST00000539941 PITHD1Q9GZP4 211 aaPredicted RBP16.27■□□□□ 0.2
COPS3-212ENST00000539941 SLC52A3Q9NQ40 469 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms