RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CLDN9O95484 217 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 GABRG2P18507 467 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 TPMTP51580 245 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 CCR3P51677 355 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 CPSF6Q16630 551 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 PRAMEF9Q5VWM5 478 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 PRMT9Q6P2P2 845 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 TTC23LQ6PF05 361 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 SFRP1Q8N474 314 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 OR52A5Q9H2C5 316 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 PHPT1Q9NRX4 125 aaPredicted RBP16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 EGFL7Q9UHF1 273 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 NDUFAF1Q9Y375 327 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 KANSL1LA0AUZ9 987 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 TRIM64A6NGJ6 449 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 TPST1O60507 370 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 HSD17B1P14061 328 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 IL10P22301 178 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 PSMA4P25789 261 aaKnown RBP16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 ACADLP28330 430 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 IMPA1P29218 277 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 NAE1Q13564 534 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 SLC36A3Q495N2 470 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 VPS26BQ4G0F5 336 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 SGO1Q5FBB7 561 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 C6orf136Q5SQH8 315 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 PTCRAQ6ISU1 281 aaPredicted RBP16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 SLC15A3Q8IY34 581 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 LMNTD1Q8N9Z9 388 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 HMGB4Q8WW32 186 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 MTFMTQ96DP5 389 aaKnown RBP16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 MED8Q96G25 268 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 SLC45A3Q96JT2 553 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 DCUN1D5Q9BTE7 237 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 DPEP2Q9H4A9 486 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 DNAJC11Q9NVH1 559 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 TRPS1Q9UHF7 1281 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 CDC14AQ9UNH5 594 aa16.52■□□□□ 0.24
PCDHB17P-201ENST00000539533 RNF103-CHMP3A0A140T963 221 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 CBFA2T3O75081 653 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 SEC24DO94855 1032 aaPredicted RBP16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 TFPTP0C1Z6 253 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 IL9P15248 144 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 CAPN3P20807 821 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 FASP25445 335 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 TEAD1P28347 426 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 BNIP2Q12982 314 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 ANKDD1AQ495B1 522 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 LCN8Q6JVE9 175 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 MINDY1Q8N5J2 469 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 SLC35B4Q969S0 331 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 C9orf16Q9BUW7 83 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 C1orf50Q9BV19 199 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 NPLQ9BXD5 320 aaPredicted RBP16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 ZDHHC5Q9C0B5 715 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 RIC8BQ9NVN3 520 aa16.52■□□□□ 0.23
PCDHB17P-201ENST00000539533 FXYD1O00168 92 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 ANGPT2O15123 496 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 C7P10643 843 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 MYCLP1P12525 358 aaPredicted RBP16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 MAPK9P45984 424 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 CAPRIN1Q14444 709 aaKnown RBP16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 ATP6AP1Q15904 470 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 OGFOD2Q6N063 350 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 CHST15Q7LFX5 561 aaPredicted RBP16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 THOC6Q86W42 341 aaKnown RBP16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 GOLM1Q8NBJ4 401 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 CENPNQ96H22 339 aaPredicted RBP16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 CMTM6Q9NX76 183 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 ACTR3BQ9P1U1 418 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 CA14Q9ULX7 337 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 OAZ3Q9UMX2 235 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 CCL27Q9Y4X3 112 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 POM121BA6NF01 834 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 C9JVG2 144 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 MANBAO00462 879 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 LATO43561 262 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 ULK1O75385 1050 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 FOSL2P15408 326 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 OXTRP30559 389 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 CLDN2P57739 230 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 ATP6AP1LQ52LC2 224 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 ADGRG5Q8IZF4 528 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 MIER2Q8N344 545 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 FNDC5Q8NAU1 212 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 ZNF480Q8WV37 535 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 ATL1Q8WXF7 558 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 OR4K3Q96R72 315 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 APOOQ9BUR5 198 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 YIPF2Q9BWQ6 316 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 C1QTNF7Q9BXJ2 289 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 CXorf21Q9HAI6 301 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 ZNF490Q9ULM2 529 aaPredicted RBP16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 CA5BQ9Y2D0 317 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 GPR45Q9Y5Y3 372 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 CFAP20Q9Y6A4 193 aaKnown RBP16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 DNAH14Q0VDD8 3507 aa16.51■□□□□ 0.23
PCDHB17P-201ENST00000539533 LSM1O15116 133 aaKnown RBP16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 KMOO15229 486 aa16.5■□□□□ 0.23
PCDHB17P-201ENST00000539533 CEACAM5P06731 702 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms