RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 A0A1W2PPM1 405 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 MAP3K7O43318 606 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 CPNE3O75131 537 aaKnown RBP13.42□□□□□ -0.26
VPS11-205ENST00000534551 KRT37O76014 449 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 FKBP9O95302 570 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 EIF2S1P05198 315 aaKnown RBP13.42□□□□□ -0.26
VPS11-205ENST00000534551 MTHFD2P13995 350 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 NPPBP16860 134 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 F8A1P23610 371 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 CNTFP26441 200 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 BCL6P41182 706 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 CSNK1G2P78368 415 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 SLC9A5Q14940 896 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 HKDC1Q2TB90 917 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 FAM219BQ5XKK7 198 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 FBXO42Q6P3S6 717 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 FAM199XQ6PEV8 388 aaPredicted RBP13.42□□□□□ -0.26
VPS11-205ENST00000534551 C17orf64Q86WR6 236 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 TMEM151BQ8IW70 566 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 IL22RA1Q8N6P7 574 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 CT55Q8WUE5 264 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 ATL1Q8WXF7 558 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.42□□□□□ -0.26
VPS11-205ENST00000534551 ZFYVE21Q9BQ24 234 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 MACROD1Q9BQ69 325 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 ZPBPQ9BS86 351 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 B3GNT4Q9C0J1 378 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 ACTR5Q9H9F9 607 aaPredicted RBP13.42□□□□□ -0.26
VPS11-205ENST00000534551 NUDT4Q9NZJ9 180 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 CPSF2Q9P2I0 782 aaKnown RBP13.42□□□□□ -0.26
VPS11-205ENST00000534551 FETUBQ9UGM5 382 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 CROTQ9UKG9 612 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 NUP210LQ5VU65 1888 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 TARM1B6A8C7 271 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 H0YGG7 62 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 RRP8O43159 456 aaKnown RBP13.41□□□□□ -0.26
VPS11-205ENST00000534551 EFSO43281 561 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 PRAMEF4O60810 478 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 EPORP19235 508 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 ITGAXP20702 1163 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 VARSP26640 1264 aaKnown RBP13.41□□□□□ -0.26
VPS11-205ENST00000534551 RORAP35398 523 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 STAT5AP42229 794 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 GCGRP47871 477 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 ARF3P61204 181 aaPredicted RBP13.41□□□□□ -0.26
VPS11-205ENST00000534551 RPS18P62269 152 aaKnown RBP13.41□□□□□ -0.26
VPS11-205ENST00000534551 ABATP80404 500 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 NFKB2Q00653 900 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 FAM83EQ2M2I3 478 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 COL28A1Q2UY09 1125 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 MANEAQ5SRI9 462 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 PRAMEF9Q5VWM5 478 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 ZNF385CQ66K41 422 aaPredicted RBP13.41□□□□□ -0.26
VPS11-205ENST00000534551 C16orf46Q6P387 395 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 CYB5D1Q6P9G0 228 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 FAM198BQ6UWH4 519 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 C6orf15Q6UXA7 325 aaPredicted RBP13.41□□□□□ -0.26
VPS11-205ENST00000534551 LRRC69Q6ZNQ3 347 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 VN1R4Q7Z5H5 301 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 GPR135Q8IZ08 494 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 ZNF740Q8NDX6 193 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.41□□□□□ -0.26
VPS11-205ENST00000534551 SLC5A11Q8WWX8 675 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 ZUFSPQ96AP4 578 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 CLIP3Q96DZ5 547 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 SCYL1Q96KG9 808 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 C10orf90Q96M02 699 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 ZNF285Q96NJ3 590 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 LHX9Q9NQ69 397 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 ANKMY1Q9P2S6 941 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 IL17BQ9UHF5 180 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 PCDHB3Q9Y5E6 796 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 NBEAQ8NFP9 2946 aa13.41□□□□□ -0.26
VPS11-205ENST00000534551 ITPR1Q14643 2758 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 IQANK1A0A1B0GTG1 560 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 LCMT2O60294 686 aaKnown RBP13.4□□□□□ -0.26
VPS11-205ENST00000534551 CCNT2O60583 730 aaKnown RBP13.4□□□□□ -0.26
VPS11-205ENST00000534551 S100BP04271 92 aaPredicted RBP13.4□□□□□ -0.26
VPS11-205ENST00000534551 NUDT17P0C025 328 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 SBK3P0C264 359 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 PYGBP11216 843 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 EZRP15311 586 aaKnown RBP13.4□□□□□ -0.26
VPS11-205ENST00000534551 CCND1P24385 295 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 SLC26A3P40879 764 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 HNMTP50135 292 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 ATP1A2P50993 1020 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 ZC3H12BQ5HYM0 836 aaKnown RBP13.4□□□□□ -0.26
VPS11-205ENST00000534551 WASHC2DQ5SRD0 308 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 SULT1C3Q6IMI6 304 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 ADNP2Q6IQ32 1131 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 TIFABQ6ZNK6 161 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 KLHDC8AQ8IYD2 350 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 DSELQ8IZU8 1212 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 SHISA5Q8N114 240 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 ESX1Q8N693 406 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 CSNK1A1LQ8N752 337 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 SNX31Q8N9S9 440 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 OR8K5Q8NH50 307 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 STAG3L4Q8TBR4 150 aa13.4□□□□□ -0.26
VPS11-205ENST00000534551 MR1Q95460 341 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms