RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 RNF14Q9UBS8 474 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 ZC3H7BQ9UGR2 993 aaKnown RBP13.41□□□□□ -0.26
SF3B2-215ENST00000534307 CHMP2BQ9UQN3 213 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 PDE10AQ9Y233 779 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 PLAAQ9Y263 795 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 IGLV3-12A0A075B6K2 115 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 E7ESA3 106 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 AGPSO00116 658 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 MASP2O00187 686 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 SOCS6O14544 535 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 SYF2O95926 243 aaKnown RBP13.4□□□□□ -0.26
SF3B2-215ENST00000534307 IGHEP01854 428 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 C8GP07360 202 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 MLLT10P55197 1068 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 SP140Q13342 867 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 PRMT9Q6P2P2 845 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 HPS6Q86YV9 775 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 RBMXL3Q8N7X1 1067 aaKnown RBP13.4□□□□□ -0.26
SF3B2-215ENST00000534307 SNF8Q96H20 258 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 CUEDC1Q9NWM3 386 aaPredicted RBP13.4□□□□□ -0.26
SF3B2-215ENST00000534307 NXT1Q9UKK6 140 aaKnown RBP13.4□□□□□ -0.26
SF3B2-215ENST00000534307 RUVBL1Q9Y265 456 aaKnown RBP13.4□□□□□ -0.26
SF3B2-215ENST00000534307 HS3ST3B1Q9Y662 390 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 MAU2Q9Y6X3 613 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 ESPL1Q14674 2120 aa13.4□□□□□ -0.26
SF3B2-215ENST00000534307 SHANK1Q9Y566 2161 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 POLQO75417 2590 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 OTOGQ6ZRI0 2925 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 CELSR1Q9NYQ6 3014 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 ENO4A6NNW6 628 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 PEX12O00623 359 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 HAT1O14929 419 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 SLC16A5O15375 505 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 EIF2S1P05198 315 aaKnown RBP13.39□□□□□ -0.27
SF3B2-215ENST00000534307 FDXRP22570 491 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 PAFAH1B1P43034 410 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 RPL21P46778 160 aaKnown RBP13.39□□□□□ -0.27
SF3B2-215ENST00000534307 RGS4P49798 205 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 PGGT1BP53609 377 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 TBPL1P62380 186 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 TSTA3Q13630 321 aaPredicted RBP13.39□□□□□ -0.27
SF3B2-215ENST00000534307 MYBPC3Q14896 1274 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 FASTKD3Q14CZ7 662 aaKnown RBP13.39□□□□□ -0.27
SF3B2-215ENST00000534307 PHKG1Q16816 387 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 ZXDCQ2QGD7 858 aaPredicted RBP13.39□□□□□ -0.27
SF3B2-215ENST00000534307 MUM1Q2TAK8 710 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 HKDC1Q2TB90 917 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 VWA5B1Q5TIE3 1220 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 GARNL3Q5VVW2 1013 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 KIRREL2Q6UWL6 708 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 MBOAT1Q6ZNC8 495 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 SHISA6Q6ZSJ9 500 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 GALNT16Q8N428 558 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 CSNK1A1LQ8N752 337 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 Q8NA96 180 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 CLEC1AQ8NC01 280 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 MVB12AQ96EY5 273 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 CFAP36Q96G28 342 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 CCDC138Q96M89 665 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 OLFM1Q99784 485 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 SOX17Q9H6I2 414 aaPredicted RBP13.39□□□□□ -0.27
SF3B2-215ENST00000534307 PARVBQ9HBI1 364 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 ZNF304Q9HCX3 659 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 CCDC177Q9NQR7 707 aaPredicted RBP13.39□□□□□ -0.27
SF3B2-215ENST00000534307 C5AR2Q9P296 337 aa13.39□□□□□ -0.27
SF3B2-215ENST00000534307 CORO1CQ9ULV4 474 aaPredicted RBP13.39□□□□□ -0.27
SF3B2-215ENST00000534307 DOCK10Q96BY6 2186 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 P2RX6O15547 441 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 FOXS1O43638 330 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 DPM1O60762 260 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 ARL4CP56559 192 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 SNRPNP63162 240 aaKnown RBP13.38□□□□□ -0.27
SF3B2-215ENST00000534307 RAPSNQ13702 412 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 DSG2Q14126 1118 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 HECTD2Q5U5R9 776 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 PRAMEF13Q5VWM6 474 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 SLC6A19Q695T7 634 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 JMJD6Q6NYC1 403 aaPredicted RBP13.38□□□□□ -0.27
SF3B2-215ENST00000534307 IGFL3Q6UXB1 125 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 MYO1HQ8N1T3 1032 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 AMER3Q8N944 861 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 STT3BQ8TCJ2 826 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 MCOLN3Q8TDD5 553 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 LINGO1Q96FE5 620 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 CABS1Q96KC9 395 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 KRT12Q99456 494 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 MESP1Q9BRJ9 268 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 MCMBPQ9BTE3 642 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 SGPP1Q9BX95 441 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 TRIM31Q9BZY9 425 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 ZNF552Q9H707 407 aaPredicted RBP13.38□□□□□ -0.27
SF3B2-215ENST00000534307 LRRC4CQ9HCJ2 640 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 PPANQ9NQ55 473 aaKnown RBP13.38□□□□□ -0.27
SF3B2-215ENST00000534307 SEMA3GQ9NS98 782 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 TMEM184CQ9NVA4 438 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 UTP6Q9NYH9 597 aaKnown RBP13.38□□□□□ -0.27
SF3B2-215ENST00000534307 MOCS1Q9NZB8 636 aa13.38□□□□□ -0.27
SF3B2-215ENST00000534307 ZNF282Q9UDV7 671 aaPredicted RBP13.38□□□□□ -0.27
SF3B2-215ENST00000534307 PLEKHB1Q9UF11 243 aaPredicted RBP13.38□□□□□ -0.27
SF3B2-215ENST00000534307 CDC23Q9UJX2 597 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms