RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 CDC16Q13042 620 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 SETDB1Q15047 1291 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 FBXO42Q6P3S6 717 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 LRIG3Q6UXM1 1119 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 LRRC70Q7Z2Q7 622 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 CROCCP2Q86T23 111 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 TRABD2AQ86V40 505 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 TMEM126BQ8IUX1 230 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 ABHD11Q8NFV4 315 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 SNIP1Q8TAD8 396 aaKnown RBP13.97□□□□□ -0.17
SF3B2-214ENST00000533595 NEIL2Q969S2 332 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 SELENOSQ9BQE4 189 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 CAPS2Q9BXY5 557 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 SPRTNQ9H040 489 aaPredicted RBP13.97□□□□□ -0.17
SF3B2-214ENST00000533595 IRAK4Q9NWZ3 460 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 TMEM216Q9P0N5 145 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 OPTCQ9UBM4 332 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 PCDHB3Q9Y5E6 796 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 CELSR3Q9NYQ7 3312 aa13.97□□□□□ -0.17
SF3B2-214ENST00000533595 SDK2Q58EX2 2172 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 CACNA1BQ00975 2339 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.96□□□□□ -0.17
SF3B2-214ENST00000533595 COPEO14579 308 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 RGS16O15492 202 aaPredicted RBP13.96□□□□□ -0.17
SF3B2-214ENST00000533595 TLX3O43711 291 aaPredicted RBP13.96□□□□□ -0.17
SF3B2-214ENST00000533595 KIAA0754O94854 1291 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 TIAF1O95411 115 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 SBK3P0C264 359 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 ZNF28P17035 718 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 GNAZP19086 355 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 CRHR1P34998 444 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 GRK3P35626 688 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 VSX2P58304 361 aaPredicted RBP13.96□□□□□ -0.17
SF3B2-214ENST00000533595 SLC18A2Q05940 514 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 PDK4Q16654 411 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 TCTE1Q5JU00 501 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 CATSPEREQ5SY80 951 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 CEP85LQ5SZL2 805 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 FRMPD2BQ6IN97 320 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 C16orf46Q6P387 395 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 TLDC1Q6P9B6 456 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 NXPE4Q6UWF7 544 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 TMPRSS11BQ86T26 416 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 ZFAND4Q86XD8 727 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 PLD3Q8IV08 490 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 SRRM1Q8IYB3 904 aaKnown RBP13.96□□□□□ -0.17
SF3B2-214ENST00000533595 C4orf33Q8N1A6 199 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 TMEM151AQ8N4L1 468 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 PTGR2Q8N8N7 351 aaPredicted RBP13.96□□□□□ -0.17
SF3B2-214ENST00000533595 SNX31Q8N9S9 440 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 KDF1Q8NAX2 398 aaPredicted RBP13.96□□□□□ -0.17
SF3B2-214ENST00000533595 ZNF248Q8NDW4 579 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 OR4K1Q8NGD4 311 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 RNF31Q96EP0 1072 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 CNTNAP3BQ96NU0 1288 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 CNTNAP3Q9BZ76 1288 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 SPRY4Q9C004 299 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 PELI2Q9HAT8 420 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 ARGLU1Q9NWB6 273 aaPredicted RBP13.96□□□□□ -0.17
SF3B2-214ENST00000533595 GPRC5BQ9NZH0 403 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 GRID1Q9ULK0 1009 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 TMEM184BQ9Y519 407 aaPredicted RBP13.96□□□□□ -0.17
SF3B2-214ENST00000533595 ASB1Q9Y576 335 aa13.96□□□□□ -0.17
SF3B2-214ENST00000533595 TNPO3Q9Y5L0 923 aaKnown RBP13.96□□□□□ -0.17
SF3B2-214ENST00000533595 URB1O60287 2271 aaKnown RBP13.95□□□□□ -0.18
SF3B2-214ENST00000533595 LOC105369274A0A096LPK9 316 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 LOC102723532A0A0G2JNH3 316 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 H3BMH7 237 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 STX16-NPEPL1H3BU86 382 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 K7EPI3 171 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 STX16O14662 325 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 CLGNO14967 610 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 ZSCAN9O15535 394 aaPredicted RBP13.95□□□□□ -0.18
SF3B2-214ENST00000533595 ZNF749O43361 778 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 CPNE3O75131 537 aaKnown RBP13.95□□□□□ -0.18
SF3B2-214ENST00000533595 DLGAP3O95886 979 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 NTRK1P04629 796 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 CTSBP07858 339 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 LIPCP11150 499 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 TAC1P20366 129 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 RPS15AP62244 130 aaKnown RBP13.95□□□□□ -0.18
SF3B2-214ENST00000533595 PCBP2Q15366 365 aaKnown RBP eCLIP13.95□□□□□ -0.18
SF3B2-214ENST00000533595 WASHC2DQ5SRD0 308 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 PRAMEF17Q5VTA0 474 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 METTL2BQ6P1Q9 378 aaKnown RBP13.95□□□□□ -0.18
SF3B2-214ENST00000533595 SLCO4C1Q6ZQN7 724 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 PROSER1Q86XN7 944 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 OR4N4Q8N0Y3 316 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 TBC1D19Q8N5T2 526 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 RERGQ96A58 199 aaPredicted RBP13.95□□□□□ -0.18
SF3B2-214ENST00000533595 PHF21BQ96EK2 531 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 THAP11Q96EK4 314 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 ZNF285Q96NJ3 590 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 OR2A5Q96R48 311 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 SLC7A5P2Q9GIP4 190 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 ACTR5Q9H9F9 607 aaPredicted RBP13.95□□□□□ -0.18
SF3B2-214ENST00000533595 AP1M2Q9Y6Q5 423 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 MDC1Q14676 2089 aaKnown RBP13.95□□□□□ -0.18
SF3B2-214ENST00000533595 SEC16AO15027 2179 aa13.95□□□□□ -0.18
SF3B2-214ENST00000533595 MAP1BP46821 2468 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms