RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 SYNPOQ8N3V7 929 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 UBE2FQ969M7 185 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 ERLEC1Q96DZ1 483 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 APOLD1Q96LR9 279 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 PANX1Q96RD7 426 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 COPS4Q9BT78 406 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 FKBP14Q9NWM8 211 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 FAM120CQ9NX05 1096 aaKnown RBP16.11■□□□□ 0.17
CTSB-228ENST00000533455 TMEM161AQ9NX61 479 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 PSORS1C1Q9UIG5 152 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 SLCO3A1Q9UIG8 710 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 STOML2Q9UJZ1 356 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 ERVK-11Q9UQG0 969 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 RNF6Q9Y252 685 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.11■□□□□ 0.17
CTSB-228ENST00000533455 MAGEB17A8MXT2 336 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 CLDN7O95471 211 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 CTSKP43235 329 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 TPTEP56180 551 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 ZXDCQ2QGD7 858 aaPredicted RBP16.11■□□□□ 0.17
CTSB-228ENST00000533455 ANKS3Q6ZW76 656 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 GALNT10Q86SR1 603 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 C7orf34Q96L11 122 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 CTRCQ99895 268 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 KLF16Q9BXK1 252 aaPredicted RBP16.11■□□□□ 0.17
CTSB-228ENST00000533455 ZBTB20Q9HC78 741 aaPredicted RBP16.11■□□□□ 0.17
CTSB-228ENST00000533455 ABCB10Q9NRK6 738 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 CCDC59Q9P031 241 aaKnown RBP16.11■□□□□ 0.17
CTSB-228ENST00000533455 ZNF232Q9UNY5 417 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 ANAPC1Q9H1A4 1944 aa16.11■□□□□ 0.17
CTSB-228ENST00000533455 MN1Q10571 1320 aaPredicted RBP16.1■□□□□ 0.17
CTSB-228ENST00000533455 SCAMP3O14828 347 aaKnown RBP16.1■□□□□ 0.17
CTSB-228ENST00000533455 IRF1P10914 325 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 CST5P28325 142 aaPredicted RBP16.1■□□□□ 0.17
CTSB-228ENST00000533455 HNF1BP35680 557 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 NSG1P42857 185 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 SLC11A1P49279 550 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 PTPN5P54829 565 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 C21orf58P58505 322 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 ELAVL2Q12926 359 aaKnown RBP16.1■□□□□ 0.17
CTSB-228ENST00000533455 PRSS36Q5K4E3 855 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 TPGS1Q6ZTW0 290 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 SLC46A3Q7Z3Q1 461 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 P3H2Q8IVL5 708 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 DCAF4L2Q8NA75 395 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 OR8J2Q8NGG1 315 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 ALG14Q96F25 216 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 MAGEB10Q96LZ2 347 aaPredicted RBP16.1■□□□□ 0.17
CTSB-228ENST00000533455 SLC12A9Q9BXP2 914 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 TSC22D4Q9Y3Q8 395 aa16.1■□□□□ 0.17
CTSB-228ENST00000533455 TBL1XO60907 577 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 PTTG1O95997 202 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 C8GP07360 202 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 GGT2P36268 569 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 GSSP48637 474 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 TEKQ02763 1124 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 PRKCDQ05655 676 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 SLC13A2Q13183 592 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 SYT16Q17RD7 645 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 COLEC12Q5KU26 742 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 C1QTNF12Q5T7M4 302 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 STEAP3Q658P3 488 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 PDE12Q6L8Q7 609 aaKnown RBP16.09■□□□□ 0.17
CTSB-228ENST00000533455 PNCKQ6P2M8 343 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 UBE2R2Q712K3 238 aaPredicted RBP16.09■□□□□ 0.17
CTSB-228ENST00000533455 CHAC2Q8WUX2 184 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 MYDGFQ969H8 173 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 CEP44Q9C0F1 390 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 CHST8Q9H2A9 424 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 NUAK1O60285 661 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 SOCS5O75159 536 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 PARNO95453 639 aaKnown RBP16.09■□□□□ 0.17
CTSB-228ENST00000533455 CDK1P06493 297 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 GADD45AP24522 165 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 AOAHP28039 575 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 CSKP41240 450 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 HNMTP50135 292 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 KCNJ10P78508 379 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 ZNF45Q02386 682 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 ZNF33BQ06732 778 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 BCL2L1Q07817 233 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 TIGD6Q17RP2 521 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 ATAD3BQ5T9A4 648 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 FRG2Q64ET8 278 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 ZNF621Q6ZSS3 439 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 SYT12Q8IV01 421 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 SLC22A15Q8IZD6 547 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 DNAJC22Q8N4W6 341 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 AMER2Q8N7J2 671 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 FRG2BQ96QU4 278 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 RAD9AQ99638 391 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 TM6SF2Q9BZW4 377 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 ZDHHC3Q9NYG2 299 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 PADI2Q9Y2J8 665 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 TESMINQ9Y4I5 508 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 PCDHB11Q9Y5F2 797 aa16.09■□□□□ 0.17
CTSB-228ENST00000533455 NUP214P35658 2090 aaPredicted RBP16.08■□□□□ 0.17
CTSB-228ENST00000533455 MANSC4A6NHS7 340 aaPredicted RBP16.08■□□□□ 0.16
CTSB-228ENST00000533455 PRAMEF4O60810 478 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 NBNO60934 754 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms