RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 TTC29Q8NA56 475 aaPredicted RBP18.08■□□□□ 0.48
SSH3-209ENST00000532600 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.08■□□□□ 0.48
SSH3-209ENST00000532600 CPT1CQ8TCG5 803 aa18.08■□□□□ 0.48
SSH3-209ENST00000532600 IFT81Q8WYA0 676 aa18.08■□□□□ 0.48
SSH3-209ENST00000532600 INPP5DQ92835 1189 aa18.08■□□□□ 0.48
SSH3-209ENST00000532600 ZFYVE21Q9BQ24 234 aa18.08■□□□□ 0.48
SSH3-209ENST00000532600 AARSD1Q9BTE6 412 aaKnown RBP18.08■□□□□ 0.48
SSH3-209ENST00000532600 SOX17Q9H6I2 414 aaPredicted RBP18.08■□□□□ 0.48
SSH3-209ENST00000532600 ZNF552Q9H707 407 aaPredicted RBP18.08■□□□□ 0.48
SSH3-209ENST00000532600 ZBTB20Q9HC78 741 aaPredicted RBP18.08■□□□□ 0.48
SSH3-209ENST00000532600 IARS2Q9NSE4 1012 aaKnown RBP18.08■□□□□ 0.48
SSH3-209ENST00000532600 SLC17A6Q9P2U8 582 aa18.08■□□□□ 0.48
SSH3-209ENST00000532600 TAC3Q9UHF0 121 aa18.08■□□□□ 0.48
SSH3-209ENST00000532600 HS3ST3B1Q9Y662 390 aa18.08■□□□□ 0.48
SSH3-209ENST00000532600 MDC1Q14676 2089 aaKnown RBP18.07■□□□□ 0.48
SSH3-209ENST00000532600 UTP20O75691 2785 aaKnown RBP18.07■□□□□ 0.48
SSH3-209ENST00000532600 AGPSO00116 658 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 EIF3HO15372 352 aaKnown RBP eCLIP18.07■□□□□ 0.48
SSH3-209ENST00000532600 DPM1O60762 260 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 CATP04040 527 aaKnown RBP18.07■□□□□ 0.48
SSH3-209ENST00000532600 ERVK-10P10266 1014 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 SKIV2L2P42285 1042 aaKnown RBP18.07■□□□□ 0.48
SSH3-209ENST00000532600 MYBPC3Q14896 1274 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 TTLL9Q3SXZ7 439 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 SPANXN3Q5MJ09 141 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 UBAP2Q5T6F2 1119 aaKnown RBP18.07■□□□□ 0.48
SSH3-209ENST00000532600 VWA5B1Q5TIE3 1220 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 ICE2Q659A1 982 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 KIRREL2Q6UWL6 708 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 KCNMB4Q86W47 210 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 LMNTD2Q8IXW0 634 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 C2CD4AQ8NCU7 369 aaPredicted RBP18.07■□□□□ 0.48
SSH3-209ENST00000532600 FER1L6-AS2Q96M78 137 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 NDNQ99608 321 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 NAT9Q9BTE0 207 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 MRPS30Q9NP92 439 aaKnown RBP18.07■□□□□ 0.48
SSH3-209ENST00000532600 FBXL4Q9UKA2 621 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 ADAMTS6Q9UKP5 1117 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 DOCK10Q96BY6 2186 aa18.07■□□□□ 0.48
SSH3-209ENST00000532600 USP9YO00507 2555 aaPredicted RBP18.06■□□□□ 0.48
SSH3-209ENST00000532600 PEX12O00623 359 aa18.06■□□□□ 0.48
SSH3-209ENST00000532600 TTC4O95801 387 aa18.06■□□□□ 0.48
SSH3-209ENST00000532600 EIF2S1P05198 315 aaKnown RBP18.06■□□□□ 0.48
SSH3-209ENST00000532600 IMPA1P29218 277 aa18.06■□□□□ 0.48
SSH3-209ENST00000532600 RPA3P35244 121 aaPredicted RBP18.06■□□□□ 0.48
SSH3-209ENST00000532600 PRDX1Q06830 199 aaKnown RBP18.06■□□□□ 0.48
SSH3-209ENST00000532600 FAM214AQ32MH5 1076 aa18.06■□□□□ 0.48
SSH3-209ENST00000532600 CCDC25Q86WR0 208 aa18.06■□□□□ 0.48
SSH3-209ENST00000532600 CLEC1AQ8NC01 280 aa18.06■□□□□ 0.48
SSH3-209ENST00000532600 PNPLA2Q96AD5 504 aa18.06■□□□□ 0.48
SSH3-209ENST00000532600 OR2A5Q96R48 311 aa18.06■□□□□ 0.48
SSH3-209ENST00000532600 FAM167BQ9BTA0 163 aa18.06■□□□□ 0.48
SSH3-209ENST00000532600 PHACTR1Q9C0D0 580 aa18.06■□□□□ 0.48
SSH3-209ENST00000532600 CUEDC1Q9NWM3 386 aaPredicted RBP18.06■□□□□ 0.48
SSH3-209ENST00000532600 C5AR2Q9P296 337 aa18.06■□□□□ 0.48
SSH3-209ENST00000532600 MAST4O15021 2626 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 P2RX6O15547 441 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 PIM1P11309 404 aaPredicted RBP18.05■□□□□ 0.48
SSH3-209ENST00000532600 ENO3P13929 434 aaPredicted RBP18.05■□□□□ 0.48
SSH3-209ENST00000532600 GNLYP22749 145 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 PGGT1BP53609 377 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 CDKN2DP55273 166 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 GPX6P59796 221 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 TSTA3Q13630 321 aaPredicted RBP18.05■□□□□ 0.48
SSH3-209ENST00000532600 INPP5JQ15735 1006 aaPredicted RBP18.05■□□□□ 0.48
SSH3-209ENST00000532600 HKDC1Q2TB90 917 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 PLEKHN1Q494U1 663 aaPredicted RBP18.05■□□□□ 0.48
SSH3-209ENST00000532600 RBM20Q5T481 1227 aaKnown RBP18.05■□□□□ 0.48
SSH3-209ENST00000532600 IGFL3Q6UXB1 125 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 CAPN12Q6ZSI9 719 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 HPS6Q86YV9 775 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 CALML6Q8TD86 181 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 CERS2Q96G23 380 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 CCDC68Q9H2F9 335 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 ANKZF1Q9H8Y5 726 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 ZNF304Q9HCX3 659 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 ANKMY1Q9P2S6 941 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 RUVBL1Q9Y265 456 aaKnown RBP18.05■□□□□ 0.48
SSH3-209ENST00000532600 COMMD10Q9Y6G5 202 aa18.05■□□□□ 0.48
SSH3-209ENST00000532600 FFAR3O14843 346 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 HAT1O14929 419 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 GPR42O15529 346 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 SLU7O95391 586 aaKnown RBP18.04■□□□□ 0.48
SSH3-209ENST00000532600 SYF2O95926 243 aaKnown RBP18.04■□□□□ 0.48
SSH3-209ENST00000532600 C1QAP02745 245 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 AHSGP02765 367 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 SSTR1P30872 391 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 HSD17B2P37059 387 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 MAGEA4P43358 317 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 KLC1Q07866 573 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 Q0VFX4 171 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 FRG1Q14331 258 aaKnown RBP18.04■□□□□ 0.48
SSH3-209ENST00000532600 LAPTM4BQ86VI4 370 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 ATCAYQ86WG3 371 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 PLD3Q8IV08 490 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 CNTN4Q8IWV2 1026 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 SHISA5Q8N114 240 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 GALNT11Q8NCW6 608 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 STT3BQ8TCJ2 826 aa18.04■□□□□ 0.48
SSH3-209ENST00000532600 PYROXD1Q8WU10 500 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms