RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 OR7A2PQ8NGA2 310 aa2.41□□□□□ -2.02
NUP98-218ENST00000530516 CNRIP1Q96F85 164 aaPredicted RBP2.41□□□□□ -2.02
NUP98-218ENST00000530516 OTUB1Q96FW1 271 aaPredicted RBP2.41□□□□□ -2.02
NUP98-218ENST00000530516 TRIM6Q9C030 488 aaPredicted RBP2.41□□□□□ -2.02
NUP98-218ENST00000530516 PRR34Q9NV39 138 aa2.41□□□□□ -2.02
NUP98-218ENST00000530516 TEX10Q9NXF1 929 aaPredicted RBP2.41□□□□□ -2.02
NUP98-218ENST00000530516 NDE1Q9NXR1 346 aa2.41□□□□□ -2.02
NUP98-218ENST00000530516 STK26Q9P289 416 aa2.41□□□□□ -2.02
NUP98-218ENST00000530516 MUTYHQ9UIF7 546 aa2.41□□□□□ -2.02
NUP98-218ENST00000530516 CPSF3Q9UKF6 684 aaKnown RBP2.41□□□□□ -2.02
NUP98-218ENST00000530516 EDDM13A0A1B0GTR0 161 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 MTMR11A4FU01 709 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 NPIPB9F8W1W9 429 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 TADA2AO75478 443 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 CEACAM4O75871 244 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 CELF2O95319 508 aaKnown RBP2.4□□□□□ -2.03
NUP98-218ENST00000530516 STARD3NLO95772 234 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 IGHV3-13P01766 116 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 ALDH1B1P30837 517 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 PTGER3P43115 390 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 TSFMP43897 325 aaKnown RBP2.4□□□□□ -2.03
NUP98-218ENST00000530516 OR3A2P47893 321 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 ASCL1P50553 236 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 MS4A2Q01362 244 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 RASGEF1BQ0VAM2 473 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 TRAP1Q12931 704 aaKnown RBP2.4□□□□□ -2.03
NUP98-218ENST00000530516 TAB1Q15750 504 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 LETM2Q2VYF4 491 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 GDPGP1Q6ZNW5 385 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 NDUFAF2Q8N183 169 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 ANKRD13CQ8N6S4 541 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 PIK3R3Q92569 461 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 ATXN7L3BQ96GX2 97 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 AGAP4Q96P64 663 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 LRRC3BQ96PB8 259 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 PI4K2AQ9BTU6 479 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 RAB11FIP5Q9BXF6 653 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 TDRD1Q9BXT4 1180 aaKnown RBP2.4□□□□□ -2.03
NUP98-218ENST00000530516 MTMR12Q9C0I1 747 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 HOXD1Q9GZZ0 328 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 FAM49AQ9H0Q0 323 aaPredicted RBP2.4□□□□□ -2.03
NUP98-218ENST00000530516 GNB4Q9HAV0 340 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 THAP10Q9P2Z0 257 aaPredicted RBP2.4□□□□□ -2.03
NUP98-218ENST00000530516 MORF4L1Q9UBU8 362 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 CHKBQ9Y259 395 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 WIPI2Q9Y4P8 454 aa2.4□□□□□ -2.03
NUP98-218ENST00000530516 TRBV4-1A0A0J9YWV2 114 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 TRBC2A0A5B9 178 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 GLTPD2A6NH11 291 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 AP5Z1O43299 807 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 TLX2O43763 284 aaPredicted RBP2.39□□□□□ -2.03
NUP98-218ENST00000530516 GSRP00390 522 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 DNAH10OSP0CZ25 163 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 SAGP10523 405 aaPredicted RBP2.39□□□□□ -2.03
NUP98-218ENST00000530516 SELEP16581 610 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 IL11P20809 199 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 LMAN1P49257 510 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 LIMK1P53667 647 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 LIMK2P53671 638 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 UBASH3AP57075 661 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 MYL7Q01449 175 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 RALGDSQ12967 914 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 SRSF9Q13242 221 aaKnown RBP eCLIP2.39□□□□□ -2.03
NUP98-218ENST00000530516 TRIM29Q14134 588 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 PTPN14Q15678 1187 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 ERMARDQ5T6L9 678 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 OR4C11Q6IEV9 310 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 RBPMS2Q6ZRY4 209 aaKnown RBP2.39□□□□□ -2.03
NUP98-218ENST00000530516 ZBTB49Q6ZSB9 765 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 PRPF39Q86UA1 669 aaKnown RBP2.39□□□□□ -2.03
NUP98-218ENST00000530516 MAML2Q8IZL2 1156 aaPredicted RBP2.39□□□□□ -2.03
NUP98-218ENST00000530516 LINC00612Q8N6U2 182 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 RASGEF1AQ8N9B8 481 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 XXYLT1Q8NBI6 393 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 POGLUT1Q8NBL1 392 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 SLC4A11Q8NBS3 891 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 ATP8B4Q8TF62 1192 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 LRRC15Q8TF66 581 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 CHPT1Q8WUD6 406 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 KLHL5Q96PQ7 755 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 DNAI2Q9GZS0 605 aa2.39□□□□□ -2.03
NUP98-218ENST00000530516 PIH1D3Q9NQM4 214 aaKnown RBP2.39□□□□□ -2.03
NUP98-218ENST00000530516 ADAMTS9Q9P2N4 1935 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 LOC105371242A0A075B767 164 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 K7ENM7 598 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 ECE2O60344 883 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 SNAP91O60641 907 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 OR52Z1P0C646 297 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 PDHA2P29803 388 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 PCGF2P35227 344 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 ETV5P41161 510 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 CASP2P42575 452 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 PGFP49763 221 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 OR1D5P58170 312 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 CD300CQ08708 224 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 ACSM1Q08AH1 577 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 MTHFSDQ2M296 383 aaKnown RBP2.38□□□□□ -2.03
NUP98-218ENST00000530516 CRY2Q49AN0 593 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 C9orf152Q5JTZ5 239 aa2.38□□□□□ -2.03
NUP98-218ENST00000530516 SUSD4Q5VX71 490 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms