RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 GRIA3P42263 894 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 EPHA4P54764 986 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 DAB2P98082 770 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 E2F2Q14209 437 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 SLBPQ14493 270 aaKnown RBP eCLIP23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 ZRSR2Q15696 482 aaKnown RBP23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 SGO1Q5FBB7 561 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 FAM92BQ6ZTR7 304 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 RNF175Q8N4F7 328 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 CCDC3Q9BQI4 270 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 TRPS1Q9UHF7 1281 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 RAPGEFL1Q9UHV5 662 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 USH1CQ9Y6N9 552 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 FLRT2O43155 660 aa23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 CMPK1P30085 196 aa23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 CSNK1G2P78368 415 aa23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 SLC14A1Q13336 389 aa23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 TBCCQ15814 346 aa23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 KLHL35Q6PF15 583 aa23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 OR4K1Q8NGD4 311 aa23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 WDR34Q96EX3 536 aa23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 CNDP2Q96KP4 475 aaKnown RBP23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 TGM7Q96PF1 710 aa23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 TMEM9Q9P0T7 183 aa23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 POMT2Q9UKY4 750 aa23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 STK38LQ9Y2H1 464 aa23.76■■□□□ 1.39
LDLRAD3-203ENST00000528989 UGDHO60701 494 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 TGDSO95455 350 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 CCR8P51685 355 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 AQP5P55064 265 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 ABRAXAS2Q15018 415 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 GGTA1PQ4G0N0 100 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 GRHL2Q6ISB3 625 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 ASCL5Q7RTU5 278 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 OR6C4Q8NGE1 309 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 IFI44Q8TCB0 444 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 TWIST2Q8WVJ9 160 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 C3orf30Q96M34 536 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 TRIM55Q9BYV6 548 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 EHD1Q9H4M9 534 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 KLHL3Q9UH77 587 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 RIF1Q5UIP0 2472 aaKnown RBP23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 A0A0G2JND7 137 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 HDAC3O15379 428 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 LCMT2O60294 686 aaKnown RBP23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 LDOC1O95751 146 aaPredicted RBP23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 FAM107AO95990 144 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 LINC00032P0C843 101 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 PNLIPP16233 465 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 HMOX2P30519 316 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 CSF2RBP32927 897 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 ABATP80404 500 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 BTKQ06187 659 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 FCRL4Q96PJ5 515 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 MAP3K3Q99759 626 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 EBF4Q9BQW3 602 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 SYNPO2LQ9H987 977 aa23.75■■□□□ 1.39
LDLRAD3-203ENST00000528989 DMXL1Q9Y485 3027 aa23.74■■□□□ 1.39
LDLRAD3-203ENST00000528989 A0A1W2PQM1 296 aa23.74■■□□□ 1.39
LDLRAD3-203ENST00000528989 SRRM3A6NNA2 597 aaPredicted RBP23.74■■□□□ 1.39
LDLRAD3-203ENST00000528989 ENO1P06733 434 aaKnown RBP23.74■■□□□ 1.39
LDLRAD3-203ENST00000528989 HNF4AP41235 474 aa23.74■■□□□ 1.39
LDLRAD3-203ENST00000528989 CCL7P80098 99 aa23.74■■□□□ 1.39
LDLRAD3-203ENST00000528989 ZIC1Q15915 447 aa23.74■■□□□ 1.39
LDLRAD3-203ENST00000528989 TMPRSS9Q7Z410 1059 aa23.74■■□□□ 1.39
LDLRAD3-203ENST00000528989 WDR55Q9H6Y2 383 aaPredicted RBP23.74■■□□□ 1.39
LDLRAD3-203ENST00000528989 ATXN7L1Q9ULK2 861 aaPredicted RBP23.74■■□□□ 1.39
LDLRAD3-203ENST00000528989 HCN4Q9Y3Q4 1203 aa23.74■■□□□ 1.39
LDLRAD3-203ENST00000528989 UNC13CQ8NB66 2214 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 ATP6AP2A0A1C7CYW4 349 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 PROB1E7EW31 1015 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 MANBAO00462 879 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 HAT1O14929 419 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 PIP5K1BO14986 540 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 ATP6AP2O75787 350 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 GPLD1P80108 840 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 SLC5A12Q1EHB4 618 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 SLC9B1Q4ZJI4 515 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 FCRL6Q6DN72 434 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 ZNF425Q6IV72 752 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 NAXDQ8IW45 347 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 OR7G3Q8NG95 312 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 BCAS4Q8TDM0 211 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 MTERF1Q99551 399 aaKnown RBP23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 NUDT22Q9BRQ3 303 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 PELI2Q9HAT8 420 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 TMEM184CQ9NVA4 438 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 SNX3O60493 162 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 ULK1O75385 1050 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 CCNDBP1O95273 360 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 PDYNP01213 254 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 TROVE2P10155 538 aaKnown RBP eCLIP23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 ST6GAL1P15907 406 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 CKMT2P17540 419 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 RBBP5Q15291 538 aaKnown RBP23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 FIGLAQ6QHK4 219 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 DDIASQ8IXT1 998 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 ANKRD53Q8N9V6 530 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 WDR20Q8TBZ3 569 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 NAT6Q93015 286 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms