RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 PCOLCEQ15113 449 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 MEP1AQ16819 746 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 PRTGQ2VWP7 1150 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 BTBD16Q32M84 506 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 MINDY4Q4G0A6 757 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 SPNS3Q6ZMD2 512 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 ADCK2Q7Z695 626 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 SPPL2CQ8IUH8 684 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 KRT222Q8N1A0 295 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 OR2A1Q8NGT9 310 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 CA5BP1Q8WTZ4 195 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 SMPDL3AQ92484 453 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 GPR137Q96N19 417 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 PLCD4Q9BRC7 762 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 UTP23Q9BRU9 249 aaKnown RBP10.96□□□□□ -0.65
CMTM1-211ENST00000528484 KCNK13Q9HB14 408 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 FAM114A2Q9NRY5 505 aa10.96□□□□□ -0.65
CMTM1-211ENST00000528484 STOX2Q9P2F5 926 aaPredicted RBP10.96□□□□□ -0.65
CMTM1-211ENST00000528484 RUVBL1Q9Y265 456 aaKnown RBP10.96□□□□□ -0.65
CMTM1-211ENST00000528484 MTORP42345 2549 aa10.96□□□□□ -0.66
CMTM1-211ENST00000528484 NF1P21359 2839 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 PRRG2O14669 202 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 FFAR3O14843 346 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 GPR42O15529 346 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 SEC24DO94855 1032 aaPredicted RBP10.95□□□□□ -0.66
CMTM1-211ENST00000528484 MED26O95402 600 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 TSPAN12O95859 305 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 CELA2AP08217 269 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 EZRP15311 586 aaKnown RBP10.95□□□□□ -0.66
CMTM1-211ENST00000528484 CD1EP15812 388 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 HSD17B2P37059 387 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 FDFT1P37268 417 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 TAS2R50P59544 299 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 OC90Q02509 493 aaPredicted RBP10.95□□□□□ -0.66
CMTM1-211ENST00000528484 SRSF11Q05519 484 aaKnown RBP10.95□□□□□ -0.66
CMTM1-211ENST00000528484 EXT1Q16394 746 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 KRTAP21-3Q3LHN1 58 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 ANKRD20A4Q4UJ75 823 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 MEI1Q5TIA1 1274 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 PLAG1Q6DJT9 500 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 LRRC8BQ6P9F7 803 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 TMEM205Q6UW68 189 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 ZNF295-AS1Q8N0V1 137 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 GHDCQ8N2G8 530 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 MPP5Q8N3R9 675 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 LKAAEAR1Q8TD35 194 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 PANX2Q96RD6 677 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 EBNA1BP2Q99848 306 aaKnown RBP10.95□□□□□ -0.66
CMTM1-211ENST00000528484 TMEM121Q9BTD3 319 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 MCCC2Q9HCC0 563 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 KLHL1Q9NR64 748 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 SLC2A6Q9UGQ3 507 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 MEMO1Q9Y316 297 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 TCAF1Q9Y4C2 921 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 NFS1Q9Y697 457 aa10.95□□□□□ -0.66
CMTM1-211ENST00000528484 A0A0A6YYC8 382 aaPredicted RBP10.94□□□□□ -0.66
CMTM1-211ENST00000528484 NPIPA5E9PKD4 350 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 H3BMM5 538 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 I3L1I5 382 aaPredicted RBP10.94□□□□□ -0.66
CMTM1-211ENST00000528484 CD3EAPO15446 510 aaKnown RBP10.94□□□□□ -0.66
CMTM1-211ENST00000528484 IFNB1P01574 187 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 CATP04040 527 aaKnown RBP10.94□□□□□ -0.66
CMTM1-211ENST00000528484 STIP1P31948 543 aaKnown RBP10.94□□□□□ -0.66
CMTM1-211ENST00000528484 AGTR2P50052 363 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 ACVR1Q04771 509 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 FAM53BQ14153 422 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 ARHGAP19Q14CB8 494 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 HKDC1Q2TB90 917 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 ACER2Q5QJU3 275 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 FBXO42Q6P3S6 717 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 MEX3BQ6ZN04 569 aaKnown RBP10.94□□□□□ -0.66
CMTM1-211ENST00000528484 Q6ZPB1 254 aaPredicted RBP10.94□□□□□ -0.66
CMTM1-211ENST00000528484 ZNF534Q76KX8 674 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 CPEB2Q7Z5Q1 589 aaKnown RBP10.94□□□□□ -0.66
CMTM1-211ENST00000528484 SDCCAG8Q86SQ7 713 aaPredicted RBP10.94□□□□□ -0.66
CMTM1-211ENST00000528484 ZC3H7AQ8IWR0 971 aaKnown RBP10.94□□□□□ -0.66
CMTM1-211ENST00000528484 BEST3Q8N1M1 668 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 SLC5A8Q8N695 610 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 AMER3Q8N944 861 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 OR9A1PQ8NGU1 263 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 IMMP1LQ96LU5 166 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 PCYOX1Q9UHG3 505 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 AMFRQ9UKV5 643 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 NPIPA1Q9UND3 350 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 NCOA6Q14686 2063 aaPredicted RBP10.94□□□□□ -0.66
CMTM1-211ENST00000528484 SCN2AQ99250 2005 aa10.94□□□□□ -0.66
CMTM1-211ENST00000528484 FOXO6A8MYZ6 492 aa10.93□□□□□ -0.66
CMTM1-211ENST00000528484 E9PLN8 166 aa10.93□□□□□ -0.66
CMTM1-211ENST00000528484 H0YIG0 161 aa10.93□□□□□ -0.66
CMTM1-211ENST00000528484 AP3B1O00203 1094 aa10.93□□□□□ -0.66
CMTM1-211ENST00000528484 NRP2O60462 931 aa10.93□□□□□ -0.66
CMTM1-211ENST00000528484 PTMSP20962 102 aa10.93□□□□□ -0.66
CMTM1-211ENST00000528484 RPS3P23396 243 aaKnown RBP eCLIP10.93□□□□□ -0.66
CMTM1-211ENST00000528484 ATP5DP30049 168 aa10.93□□□□□ -0.66
CMTM1-211ENST00000528484 GDF10P55107 478 aa10.93□□□□□ -0.66
CMTM1-211ENST00000528484 EIF3BP55884 814 aaKnown RBP10.93□□□□□ -0.66
CMTM1-211ENST00000528484 ABATP80404 500 aa10.93□□□□□ -0.66
CMTM1-211ENST00000528484 ACTN3Q08043 901 aaPredicted RBP10.93□□□□□ -0.66
CMTM1-211ENST00000528484 TUBA3CQ13748 450 aa10.93□□□□□ -0.66
CMTM1-211ENST00000528484 PTK6Q13882 451 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms