RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 TRIM49D1C9J1S8 452 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 MEN1O00255 615 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 TXNDC9O14530 226 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 EFSO43281 561 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 NTRK1P04629 796 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 KLK3P07288 261 aaPredicted RBP16.52■□□□□ 0.24
LMX1B-203ENST00000526117 CSNK1G2P78368 415 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 VAC14Q08AM6 782 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 GPS2Q13227 327 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 TSTA3Q13630 321 aaPredicted RBP16.52■□□□□ 0.24
LMX1B-203ENST00000526117 TSNAXIP1Q2TAA8 658 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 FRMPD2BQ6IN97 320 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 KLC3Q6P597 504 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 THOC6Q86W42 341 aaKnown RBP16.52■□□□□ 0.24
LMX1B-203ENST00000526117 ACMSDQ8TDX5 336 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 UBTD2Q8WUN7 234 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 KCTD4Q8WVF5 259 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 PYCR2Q96C36 320 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 NXNL1Q96CM4 212 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 C17orf62Q9BQA9 187 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 CAPS2Q9BXY5 557 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 GPR87Q9BY21 358 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 SPRTNQ9H040 489 aaPredicted RBP16.52■□□□□ 0.24
LMX1B-203ENST00000526117 ALG9Q9H6U8 611 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 GPRC5BQ9NZH0 403 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 KCND3Q9UK17 655 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 RAB21Q9UL25 225 aa16.52■□□□□ 0.24
LMX1B-203ENST00000526117 H7BY64 318 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 HAT1O14929 419 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 KLK8O60259 260 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 NRP2O60462 931 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 NUDT17P0C025 328 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 RAB40ALP0C0E4 278 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 LIFP15018 202 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 KCNC1P48547 511 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 CCR8P51685 355 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 IRF9Q00978 393 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 ERCC6LQ2NKX8 1250 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 PRTGQ2VWP7 1150 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 FAM214AQ32MH5 1076 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 GARNL3Q5VVW2 1013 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 METTL2BQ6P1Q9 378 aaKnown RBP16.51■□□□□ 0.23
LMX1B-203ENST00000526117 CCDC81Q6ZN84 652 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 TTC29Q8NA56 475 aaPredicted RBP16.51■□□□□ 0.23
LMX1B-203ENST00000526117 UBLCP1Q8WVY7 318 aaPredicted RBP16.51■□□□□ 0.23
LMX1B-203ENST00000526117 CLIP3Q96DZ5 547 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 PRAP1Q96NZ9 151 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 GBP5Q96PP8 586 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 TMEM79Q9BSE2 394 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 NDC1Q9BTX1 674 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 GPN2Q9H9Y4 310 aaPredicted RBP16.51■□□□□ 0.23
LMX1B-203ENST00000526117 PELI2Q9HAT8 420 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 SH2B3Q9UQQ2 575 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 KCNE2Q9Y6J6 123 aa16.51■□□□□ 0.23
LMX1B-203ENST00000526117 H0YGG7 62 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 TAPBPO15533 448 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 RFPL1O75677 317 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 CTSBP07858 339 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 CD63P08962 238 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 RBP1P09455 135 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 CDH1P12830 882 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 MTHFD2P13995 350 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 GRK3P35626 688 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 GMPRP36959 345 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 HSD17B3P37058 310 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 ARF3P61204 181 aaPredicted RBP16.5■□□□□ 0.23
LMX1B-203ENST00000526117 PCDH1Q08174 1060 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 TECRLQ5HYJ1 363 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 PRAMEF17Q5VTA0 474 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 ARHGEF39Q8N4T4 335 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 MREGQ8N565 214 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 ZNF655Q8N720 491 aaPredicted RBP16.5■□□□□ 0.23
LMX1B-203ENST00000526117 MZB1Q8WU39 189 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 HNRNPLLQ8WVV9 542 aaKnown RBP16.5■□□□□ 0.23
LMX1B-203ENST00000526117 SLC5A11Q8WWX8 675 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 NEIL2Q969S2 332 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 RERGQ96A58 199 aaPredicted RBP16.5■□□□□ 0.23
LMX1B-203ENST00000526117 MVB12AQ96EY5 273 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 UNKQ9C0B0 810 aaKnown RBP16.5■□□□□ 0.23
LMX1B-203ENST00000526117 PITHD1Q9GZP4 211 aaPredicted RBP16.5■□□□□ 0.23
LMX1B-203ENST00000526117 EHD1Q9H4M9 534 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 CD274Q9NZQ7 290 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 COPG2Q9UBF2 871 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 CROTQ9UKG9 612 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 TMCO1Q9UM00 188 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 SLC22A14Q9Y267 594 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 PCDHGA4Q9Y5G9 962 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 HEATR5BQ9P2D3 2071 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 LOC400499M0QZD8 3231 aa16.5■□□□□ 0.23
LMX1B-203ENST00000526117 LOC105369274A0A096LPK9 316 aa16.49■□□□□ 0.23
LMX1B-203ENST00000526117 LOC102723532A0A0G2JNH3 316 aa16.49■□□□□ 0.23
LMX1B-203ENST00000526117 A0A0J9YVX5 310 aa16.49■□□□□ 0.23
LMX1B-203ENST00000526117 A0A1B0GX78 115 aa16.49■□□□□ 0.23
LMX1B-203ENST00000526117 TRBC2A0A5B9 178 aa16.49■□□□□ 0.23
LMX1B-203ENST00000526117 DSCR3O14972 297 aa16.49■□□□□ 0.23
LMX1B-203ENST00000526117 STK16O75716 305 aa16.49■□□□□ 0.23
LMX1B-203ENST00000526117 WDR47O94967 919 aa16.49■□□□□ 0.23
LMX1B-203ENST00000526117 S100BP04271 92 aaPredicted RBP16.49■□□□□ 0.23
LMX1B-203ENST00000526117 CAPN1P07384 714 aa16.49■□□□□ 0.23
LMX1B-203ENST00000526117 GNAZP19086 355 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms