RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SLC35E2BP0CK96 405 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 CCDC166P0CW27 439 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 CD1DP15813 335 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 NPPBP16860 134 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 HIST1H2ADP20671 130 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 SLC12A2P55011 1212 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 POLE2P56282 527 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 AP1S2P56377 157 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 RPS15P62841 145 aaKnown RBP17.05■□□□□ 0.32
CLK4-211ENST00000522556 CSNK1G2P78368 415 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 ABATP80404 500 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 DCDP81605 110 aaKnown RBP17.05■□□□□ 0.32
CLK4-211ENST00000522556 IRF9Q00978 393 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 CSHL1Q14406 222 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 GRM7Q14831 915 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 GLE1Q53GS7 698 aaKnown RBP17.05■□□□□ 0.32
CLK4-211ENST00000522556 GRTP1Q5TC63 336 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 MLIPQ5VWP3 458 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 BORAQ6PGQ7 559 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 VN1R4Q7Z5H5 301 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 SYVN1Q86TM6 617 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 RELL1Q8IUW5 271 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 ARHGEF39Q8N4T4 335 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 PROKR1Q8TCW9 393 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 ADAMTS17Q8TE56 1095 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 HIST1H2AHQ96KK5 128 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 TSNARE1Q96NA8 513 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 HIST1H2AJQ99878 128 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 H2AFJQ9BTM1 129 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 GPR87Q9BY21 358 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 DERL2Q9GZP9 239 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 ACSS3Q9H6R3 686 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 ENAMQ9NRM1 1142 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 CTNNAL1Q9UBT7 734 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 CTSFQ9UBX1 484 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 SNX7Q9UNH6 387 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 NOVA2Q9UNW9 492 aaKnown RBP17.05■□□□□ 0.32
CLK4-211ENST00000522556 MED13Q9UHV7 2174 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 PIEZO2Q9H5I5 2752 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 HYKKA2RU49 373 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 NCF1BA6NI72 391 aaPredicted RBP17.04■□□□□ 0.32
CLK4-211ENST00000522556 NCF1CA8MVU1 366 aaPredicted RBP17.04■□□□□ 0.32
CLK4-211ENST00000522556 MASP2O00187 686 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 FFAR3O14843 346 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 DSCR3O14972 297 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 GPR42O15529 346 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 ENO2P09104 434 aaPredicted RBP17.04■□□□□ 0.32
CLK4-211ENST00000522556 FAM153BP0C7A2 387 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 NCF1P14598 390 aaPredicted RBP17.04■□□□□ 0.32
CLK4-211ENST00000522556 EZRP15311 586 aaKnown RBP17.04■□□□□ 0.32
CLK4-211ENST00000522556 STMN1P16949 149 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 AGXTP21549 392 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 SPRP35270 261 aaPredicted RBP17.04■□□□□ 0.32
CLK4-211ENST00000522556 BCL6P41182 706 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 RAB10P61026 200 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 MC1RQ01726 317 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 UAP1Q16222 522 aaPredicted RBP17.04■□□□□ 0.32
CLK4-211ENST00000522556 UGT8Q16880 541 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 FAM153CQ494X1 144 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 CRTC2Q53ET0 693 aaPredicted RBP17.04■□□□□ 0.32
CLK4-211ENST00000522556 TCTE1Q5JU00 501 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 CATSPEREQ5SY80 951 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 LCTLQ6UWM7 567 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 CSNK1A1LQ8N752 337 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 TTC29Q8NA56 475 aaPredicted RBP17.04■□□□□ 0.32
CLK4-211ENST00000522556 TSPAN17Q96FV3 270 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 ARHGAP9Q9BRR9 750 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 TRIM55Q9BYV6 548 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 IFT80Q9P2H3 777 aaPredicted RBP17.04■□□□□ 0.32
CLK4-211ENST00000522556 OARD1Q9Y530 152 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 KCNMB2Q9Y691 235 aa17.04■□□□□ 0.32
CLK4-211ENST00000522556 TNRC6AQ8NDV7 1962 aaKnown RBP17.04■□□□□ 0.32
CLK4-211ENST00000522556 C9J4A7 227 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 K7EM74 188 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 LCMT2O60294 686 aaKnown RBP17.03■□□□□ 0.32
CLK4-211ENST00000522556 SRPX2O60687 465 aaPredicted RBP17.03■□□□□ 0.32
CLK4-211ENST00000522556 GDF5P43026 501 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 KCNC1P48547 511 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 CSRP3P50461 194 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 NAB1Q13506 487 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 MROH9Q5TGP6 573 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 CAPN13Q6MZZ7 669 aaPredicted RBP17.03■□□□□ 0.32
CLK4-211ENST00000522556 MRPL14Q6P1L8 145 aaKnown RBP17.03■□□□□ 0.32
CLK4-211ENST00000522556 SHISA6Q6ZSJ9 500 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 ADAMTSL2Q86TH1 951 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 C17orf64Q86WR6 236 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 ZNF843Q8N446 348 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 ZNF740Q8NDX6 193 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 EXT2Q93063 718 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 NEIL2Q969S2 332 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 ESAMQ96AP7 390 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 UBXN10Q96LJ8 280 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 EGFL8Q99944 293 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 DPH2Q9BQC3 489 aaPredicted RBP17.03■□□□□ 0.32
CLK4-211ENST00000522556 MESP1Q9BRJ9 268 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 TMEM79Q9BSE2 394 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 FUT8Q9BYC5 575 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 FAM129AQ9BZQ8 928 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 L2HGDHQ9H9P8 463 aa17.03■□□□□ 0.32
CLK4-211ENST00000522556 IGSF5Q9NSI5 407 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms