RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 UBAP2Q5T6F2 1119 aaKnown RBP19.73■□□□□ 0.75
TRIM35-203ENST00000521253 CAPN13Q6MZZ7 669 aaPredicted RBP19.73■□□□□ 0.75
TRIM35-203ENST00000521253 RELL1Q8IUW5 271 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 PLD3Q8IV08 490 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 SPATA6LQ8N4H0 392 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 DTWD1Q8N5C7 304 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 OR56A3Q8NH54 315 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 APOBEC4Q8WW27 367 aaKnown RBP19.73■□□□□ 0.75
TRIM35-203ENST00000521253 PYCR2Q96C36 320 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 DHRS4Q9BTZ2 278 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 UNKQ9C0B0 810 aaKnown RBP19.73■□□□□ 0.75
TRIM35-203ENST00000521253 SLC22A11Q9NSA0 550 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 KCNMB2Q9Y691 235 aa19.73■□□□□ 0.75
TRIM35-203ENST00000521253 HYKKA2RU49 373 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 KLF7O75840 302 aaPredicted RBP19.72■□□□□ 0.75
TRIM35-203ENST00000521253 STMN1P16949 149 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 HRH2P25021 359 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 TSNQ15631 228 aaKnown RBP19.72■□□□□ 0.75
TRIM35-203ENST00000521253 ZKSCAN8Q15776 578 aaPredicted RBP19.72■□□□□ 0.75
TRIM35-203ENST00000521253 PRTGQ2VWP7 1150 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 LCTLQ6UWM7 567 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 CEP128Q6ZU80 1094 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 CSNK1A1LQ8N752 337 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 ADAMTS17Q8TE56 1095 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 ATL1Q8WXF7 558 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 FMO2Q99518 471 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 DERL2Q9GZP9 239 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 TMEM184CQ9NVA4 438 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 GEMIN8Q9NWZ8 242 aaKnown RBP19.72■□□□□ 0.75
TRIM35-203ENST00000521253 CTNNAL1Q9UBT7 734 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 GPN3Q9UHW5 284 aaPredicted RBP19.72■□□□□ 0.75
TRIM35-203ENST00000521253 MAN2B2Q9Y2E5 1009 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 PADI2Q9Y2J8 665 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 FER1L5A0AVI2 2057 aa19.72■□□□□ 0.75
TRIM35-203ENST00000521253 CNOT3O75175 753 aaKnown RBP19.71■□□□□ 0.75
TRIM35-203ENST00000521253 CCDC166P0CW27 439 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 CDH1P12830 882 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 NPPBP16860 134 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 FOXL2P58012 376 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 RAB10P61026 200 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 SLMAPQ14BN4 828 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 HKDC1Q2TB90 917 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 MRPL14Q6P1L8 145 aaKnown RBP19.71■□□□□ 0.75
TRIM35-203ENST00000521253 ADAMTSL2Q86TH1 951 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 C17orf64Q86WR6 236 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 ZNF843Q8N446 348 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 METTL27Q8N6F8 245 aaPredicted RBP19.71■□□□□ 0.75
TRIM35-203ENST00000521253 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.71■□□□□ 0.75
TRIM35-203ENST00000521253 THAP4Q8WY91 577 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 RERGQ96A58 199 aaPredicted RBP19.71■□□□□ 0.75
TRIM35-203ENST00000521253 C10orf90Q96M02 699 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 OR4K3Q96R72 315 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 TSPYL1Q9H0U9 437 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 OARD1Q9Y530 152 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 PCM1Q15154 2024 aa19.71■□□□□ 0.75
TRIM35-203ENST00000521253 SPTA1P02549 2419 aa19.7■□□□□ 0.74
TRIM35-203ENST00000521253 ONECUT2O95948 504 aa19.7■□□□□ 0.74
TRIM35-203ENST00000521253 PHBP35232 272 aa19.7■□□□□ 0.74
TRIM35-203ENST00000521253 OR1D4P47884 311 aa19.7■□□□□ 0.74
TRIM35-203ENST00000521253 CSNK1G2P78368 415 aa19.7■□□□□ 0.74
TRIM35-203ENST00000521253 CDKL1Q00532 357 aa19.7■□□□□ 0.74
TRIM35-203ENST00000521253 KCNAB2Q13303 367 aa19.7■□□□□ 0.74
TRIM35-203ENST00000521253 MRRFQ96E11 262 aaKnown RBP19.7■□□□□ 0.74
TRIM35-203ENST00000521253 CABS1Q96KC9 395 aa19.7■□□□□ 0.74
TRIM35-203ENST00000521253 CYTH2Q99418 400 aa19.7■□□□□ 0.74
TRIM35-203ENST00000521253 HAUS8Q9BT25 410 aa19.7■□□□□ 0.74
TRIM35-203ENST00000521253 ADNPQ9H2P0 1102 aa19.7■□□□□ 0.74
TRIM35-203ENST00000521253 CDC42EP4Q9H3Q1 356 aaKnown RBP19.7■□□□□ 0.74
TRIM35-203ENST00000521253 RUVBL1Q9Y265 456 aaKnown RBP19.7■□□□□ 0.74
TRIM35-203ENST00000521253 PTRH2Q9Y3E5 179 aaKnown RBP19.7■□□□□ 0.74
TRIM35-203ENST00000521253 BSNQ9UPA5 3926 aa19.7■□□□□ 0.74
TRIM35-203ENST00000521253 P2RX6O15547 441 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 ACSL3O95573 720 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 ANXA5P08758 320 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 CD63P08962 238 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 SFTPCP11686 197 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 CD1DP15813 335 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 GMPRP36959 345 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 MUM1Q2TAK8 710 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 FRA10AC1Q70Z53 315 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 COX15Q7KZN9 410 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 CMC1Q7Z7K0 106 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 TMEM151BQ8IW70 566 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 OR2Y1Q8NGV0 311 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 FKBP10Q96AY3 582 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 UBXN10Q96LJ8 280 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 EGFL8Q99944 293 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 ACSS3Q9H6R3 686 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 TUBD1Q9UJT1 453 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 MAU2Q9Y6X3 613 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 HEATR5BQ9P2D3 2071 aa19.69■□□□□ 0.74
TRIM35-203ENST00000521253 ANKRD12Q6UB98 2062 aa19.68■□□□□ 0.74
TRIM35-203ENST00000521253 PIM1P11309 404 aaPredicted RBP19.68■□□□□ 0.74
TRIM35-203ENST00000521253 FOLR3P41439 243 aa19.68■□□□□ 0.74
TRIM35-203ENST00000521253 PMS2P54278 862 aa19.68■□□□□ 0.74
TRIM35-203ENST00000521253 EMP3P54852 163 aa19.68■□□□□ 0.74
TRIM35-203ENST00000521253 ATP6V0D1P61421 351 aa19.68■□□□□ 0.74
TRIM35-203ENST00000521253 RPS15AP62244 130 aaKnown RBP19.68■□□□□ 0.74
TRIM35-203ENST00000521253 CSHL1Q14406 222 aa19.68■□□□□ 0.74
TRIM35-203ENST00000521253 OVCH1Q7RTY7 1134 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms