RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 CCDC74BQ96LY2 380 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 MAGEB10Q96LZ2 347 aaPredicted RBP17.1■□□□□ 0.33
SDC2-205ENST00000520233 TMEM74Q96NL1 305 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 EFCAB11Q9BUY7 163 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 KLHL25Q9H0H3 589 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 ZNF768Q9H5H4 540 aaKnown RBP17.1■□□□□ 0.33
SDC2-205ENST00000520233 DNAH14Q0VDD8 3507 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 ZFHX2Q9C0A1 2572 aaPredicted RBP17.1■□□□□ 0.33
SDC2-205ENST00000520233 GOLGA4Q13439 2230 aaKnown RBP17.09■□□□□ 0.33
SDC2-205ENST00000520233 A8MU76 341 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 UBFD1O14562 309 aaKnown RBP17.09■□□□□ 0.33
SDC2-205ENST00000520233 GIPC1O14908 333 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 SNUPNO95149 360 aaKnown RBP17.09■□□□□ 0.33
SDC2-205ENST00000520233 CLDN9O95484 217 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 CXCR2P25025 360 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 HNF4AP41235 474 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 CCR10P46092 362 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 ABCE1P61221 599 aaKnown RBP17.09■□□□□ 0.33
SDC2-205ENST00000520233 RELAQ04206 551 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 BST1Q10588 318 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 LAPTM5Q13571 262 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 ZIC1Q15915 447 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 ARL13AQ5H913 290 aaPredicted RBP17.09■□□□□ 0.33
SDC2-205ENST00000520233 DHRS13Q6UX07 377 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 GPRIN3Q6ZVF9 776 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 MILR1Q7Z6M3 343 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 LSMEM2Q8N112 164 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 OR4F6Q8NGB9 312 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 AGAP11Q8TF27 550 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 GRAMD1AQ96CP6 724 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 TCTN2Q96GX1 697 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 SLC41A2Q96JW4 573 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 MAGEB18Q96M61 343 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 AIF1LQ9BQI0 150 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 PITHD1Q9GZP4 211 aaPredicted RBP17.09■□□□□ 0.33
SDC2-205ENST00000520233 CHRNA10Q9GZZ6 450 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 EML4Q9HC35 981 aaKnown RBP17.09■□□□□ 0.33
SDC2-205ENST00000520233 MID1IP1Q9NPA3 183 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 TRPS1Q9UHF7 1281 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 ZNF225Q9UK10 706 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 BTRCQ9Y297 605 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 RP1P56715 2156 aa17.09■□□□□ 0.33
SDC2-205ENST00000520233 ASXL3Q9C0F0 2248 aa17.08■□□□□ 0.33
SDC2-205ENST00000520233 A0A1B0GTL3 188 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 MAP3K7O43318 606 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 ITM2AO43736 263 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 ESRRBO95718 433 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 JUPP14923 745 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 EZRP15311 586 aaKnown RBP17.08■□□□□ 0.32
SDC2-205ENST00000520233 CD22P20273 847 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 ARRB2P32121 409 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 CCKBRP32239 447 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 GRK3P35626 688 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 ARL1P40616 181 aaPredicted RBP17.08■□□□□ 0.32
SDC2-205ENST00000520233 SLC1A6P48664 564 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 ARL4DP49703 201 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 PDX1P52945 283 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 INHBCP55103 352 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 ERVPABLB-1P60509 514 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 SH3BP2P78314 561 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 HSD11B2P80365 405 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 REEP5Q00765 189 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 SLBPQ14493 270 aaKnown RBP eCLIP17.08■□□□□ 0.32
SDC2-205ENST00000520233 GGTA1PQ4G0N0 100 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 PAGE2BQ5JRK9 111 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 GRHL2Q6ISB3 625 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 SYVN1Q86TM6 617 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 KRT78Q8N1N4 520 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 LRRC8CQ8TDW0 803 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 CDK15Q96Q40 435 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 SARGQ9BW04 601 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 NT5DC2Q9H857 520 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 PDE7BQ9NP56 450 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 THAP1Q9NVV9 213 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 GEMIN8Q9NWZ8 242 aaKnown RBP17.08■□□□□ 0.32
SDC2-205ENST00000520233 SOHLH2Q9NX45 425 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 RNF11Q9Y3C5 154 aa17.08■□□□□ 0.32
SDC2-205ENST00000520233 TRBC2A0A5B9 178 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 TMX2-CTNND1H3BSU7 103 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 HAT1O14929 419 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 NRP2O60462 931 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 PRAMEF10O60809 474 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 SNNO75324 88 aaPredicted RBP17.07■□□□□ 0.32
SDC2-205ENST00000520233 OR4F21O95013 312 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 HSPA4LO95757 839 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 MT-CO3P00414 261 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 CHRNGP07510 517 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 NELFEP18615 380 aaKnown RBP17.07■□□□□ 0.32
SDC2-205ENST00000520233 MDH1P40925 334 aaKnown RBP17.07■□□□□ 0.32
SDC2-205ENST00000520233 SEPHS1P49903 392 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 MEF2AQ02078 507 aaPredicted RBP17.07■□□□□ 0.32
SDC2-205ENST00000520233 HIST2H2ACQ16777 129 aaPredicted RBP17.07■□□□□ 0.32
SDC2-205ENST00000520233 PHF19Q5T6S3 580 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 HIST2H2AA3Q6FI13 130 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 LETMD1Q6P1Q0 360 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 ATG14Q6ZNE5 492 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 RGS9BPQ6ZS82 235 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 RNF44Q7L0R7 432 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 B3GNT8Q7Z7M8 397 aa17.07■□□□□ 0.32
SDC2-205ENST00000520233 CUZD1Q86UP6 607 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms