RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 JRKLQ9Y4A0 524 aa11.84□□□□□ -0.51
CSMD1-205ENST00000519623 DIDO1Q9BTC0 2240 aaKnown RBP11.83□□□□□ -0.52
CSMD1-205ENST00000519623 A0A1W2PQ72 361 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 ZNF839A8K0R7 811 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 FOXS1O43638 330 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 KIF5CO60282 957 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 VPS26AO75436 327 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 HAUS5O94927 633 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 LDLRP01130 860 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 MPC1LP0DKB6 136 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 ERVK-10P10266 1014 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 ACPPP15309 386 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 FBLP22087 321 aaKnown RBP11.83□□□□□ -0.52
CSMD1-205ENST00000519623 SKIV2L2P42285 1042 aaKnown RBP11.83□□□□□ -0.52
CSMD1-205ENST00000519623 TSFMP43897 325 aaKnown RBP11.83□□□□□ -0.52
CSMD1-205ENST00000519623 EMP2P54851 167 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 SNRPNP63162 240 aaKnown RBP11.83□□□□□ -0.52
CSMD1-205ENST00000519623 ABATP80404 500 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 TIAL1Q01085 375 aaKnown RBP eCLIP11.83□□□□□ -0.52
CSMD1-205ENST00000519623 TSTA3Q13630 321 aaPredicted RBP11.83□□□□□ -0.52
CSMD1-205ENST00000519623 DSG2Q14126 1118 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 TTLL9Q3SXZ7 439 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 IRAK1BP1Q5VVH5 260 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 GARNL3Q5VVW2 1013 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 CCDC137Q6PK04 289 aaKnown RBP11.83□□□□□ -0.52
CSMD1-205ENST00000519623 ISLR2Q6UXK2 745 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 NDUFAF7Q7L592 441 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 CSNK1A1LQ8N752 337 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 NAT8LQ8N9F0 302 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 CATSPER1Q8NEC5 780 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 CD200R1Q8TD46 325 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 COG1Q8WTW3 980 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 PSMF1Q92530 271 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 MVB12AQ96EY5 273 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 GPR21Q99679 349 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 TGIF2Q9GZN2 237 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 ZNF160Q9HCG1 818 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 TRPC4Q9UBN4 977 aa11.83□□□□□ -0.52
CSMD1-205ENST00000519623 A1L4Q6 167 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 IDSB3KWA1 339 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 SMAPO00193 183 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 FFAR3O14843 346 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 GPR42O15529 346 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 P2RX6O15547 441 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 ZBTB14O43829 449 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 CCNDBP1O95273 360 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 COX6A1P12074 109 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 ENO3P13929 434 aaPredicted RBP11.82□□□□□ -0.52
CSMD1-205ENST00000519623 EZRP15311 586 aaKnown RBP11.82□□□□□ -0.52
CSMD1-205ENST00000519623 SLC1A2P43004 574 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 MFAP5Q13361 173 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 ZNF169Q14929 603 aaPredicted RBP11.82□□□□□ -0.52
CSMD1-205ENST00000519623 LONRF1Q17RB8 773 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 LINC00696Q6ZRV3 163 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 LMNTD2Q8IXW0 634 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 KBTBD2Q8IY47 623 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 ST6GALNAC3Q8NDV1 305 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 GRHL3Q8TE85 626 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 MMABQ96EY8 250 aaPredicted RBP11.82□□□□□ -0.52
CSMD1-205ENST00000519623 AGPAT4Q9NRZ5 378 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 C20orf96Q9NUD7 363 aaPredicted RBP11.82□□□□□ -0.52
CSMD1-205ENST00000519623 UTP6Q9NYH9 597 aaKnown RBP11.82□□□□□ -0.52
CSMD1-205ENST00000519623 PCYOX1Q9UHG3 505 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 FBXO5Q9UKT4 447 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 SLC5A6Q9Y289 635 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 COMMD10Q9Y6G5 202 aa11.82□□□□□ -0.52
CSMD1-205ENST00000519623 SCN3AQ9NY46 2000 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 A0A0A6YYC8 382 aaPredicted RBP11.81□□□□□ -0.52
CSMD1-205ENST00000519623 H7BY64 318 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 I3L1I5 382 aaPredicted RBP11.81□□□□□ -0.52
CSMD1-205ENST00000519623 TXNDC9O14530 226 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 MAP2K7O14733 419 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 HAT1O14929 419 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 CLDN1O95832 211 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 SYF2O95926 243 aaKnown RBP11.81□□□□□ -0.52
CSMD1-205ENST00000519623 PRR35P0CG20 571 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 IMPA1P29218 277 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 SOX11P35716 441 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 EFNA3P52797 238 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 MPP1Q00013 466 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 FAM53BQ14153 422 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 TLR1Q15399 786 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 SYT16Q17RD7 645 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 HSP90AA5PQ58FG0 334 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 B3GNTL1Q67FW5 361 aaPredicted RBP11.81□□□□□ -0.52
CSMD1-205ENST00000519623 UBE2R2Q712K3 238 aaPredicted RBP11.81□□□□□ -0.52
CSMD1-205ENST00000519623 PIWIL4Q7Z3Z4 852 aaKnown RBP11.81□□□□□ -0.52
CSMD1-205ENST00000519623 PLD3Q8IV08 490 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 CPNE9Q8IYJ1 553 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 SHISA5Q8N114 240 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 AMER2Q8N7J2 671 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 CALML6Q8TD86 181 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 FAR1Q8WVX9 515 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 RERGQ96A58 199 aaPredicted RBP11.81□□□□□ -0.52
CSMD1-205ENST00000519623 CNDP1Q96KN2 507 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 PRAP1Q96NZ9 151 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 EBNA1BP2Q99848 306 aaKnown RBP11.81□□□□□ -0.52
CSMD1-205ENST00000519623 AARSD1Q9BTE6 412 aaKnown RBP11.81□□□□□ -0.52
CSMD1-205ENST00000519623 YIPF2Q9BWQ6 316 aa11.81□□□□□ -0.52
CSMD1-205ENST00000519623 CCDC68Q9H2F9 335 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms