RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 GALCP54803 685 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 DIO3P55073 304 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 ORC2Q13416 577 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 THOC5Q13769 683 aaKnown RBP-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 DAG1Q14118 895 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 SERTAD2Q14140 314 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 EXT1Q16394 746 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZNF630Q2M218 657 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 SPATA46Q5T0L3 261 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 DENND1BQ6P3S1 775 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 RFWD3Q6PCD5 774 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 DET1Q7L5Y6 550 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 LDB1Q86U70 411 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 FAM160B2Q86V87 743 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 RAVER1Q8IY67 606 aaKnown RBP-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 RASGEF1CQ8N431 466 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 GCSAMQ8N6F7 178 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 EMC1Q8N766 993 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 KCTD6Q8NC69 237 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 OR10G2Q8NGC3 310 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 UBALD1Q8TB05 177 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 PHLDA1Q8WV24 401 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 LRTOMTQ8WZ04 291 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 DAZLQ92904 295 aaKnown RBP-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 MTMR8Q96EF0 704 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 RNFT2Q96EX2 444 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZBED6CLQ96FA7 236 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 ACOX2Q99424 681 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 NRTNQ99748 197 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 LMAN2LQ9H0V9 348 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 ARRDC1-AS1Q9H2J1 176 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 Q9N2K0 584 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 ARFGAP3Q9NP61 516 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 FGF21Q9NSA1 209 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 SLC2A8Q9NY64 477 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 TBC1D29Q9UFV1 150 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 CEPT1Q9Y6K0 416 aa-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 DIDO1Q9BTC0 2240 aaKnown RBP-1.21□□□□□ -2.6
RNU6-542P-201ENST00000516405 YEATS2Q9ULM3 1422 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 IGKV2-29A2NJV5 120 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 C3orf84H3BNL1 204 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 TEX28O15482 410 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 OR6B1O95007 311 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 NPPBP16860 134 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 CSRP1P21291 193 aaKnown RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 HMGCLP35914 325 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 PNPLA4P41247 253 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 PSMC4P43686 418 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 OR3A2P47893 321 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 TM4SF4P48230 202 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZNF83P51522 516 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 ADARP55265 1226 aaKnown RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 MAZP56270 477 aaKnown RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 FMODQ06828 376 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 DMPKQ09013 629 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 BAMBIQ13145 260 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 MSLNQ13421 630 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 CRMP1Q14194 572 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 POLD3Q15054 466 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 TMEM266Q2M3C6 531 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 POM121L1PQ3SYA9 428 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 LCN1P1Q5VSP4 162 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 OR52W1Q6IF63 320 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 DPPA4Q7L190 304 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 GPAT4Q86UL3 456 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 CNTROBQ8N137 903 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZNF567Q8N184 647 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZNF664Q8N3J9 261 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 CPSF7Q8N684 471 aaKnown RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 OR5M8Q8NGP6 311 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 OR52N5Q8NH56 324 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 CHCHD10Q8WYQ3 142 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 ROBO4Q8WZ75 1007 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZNF560Q96MR9 790 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 BBS4Q96RK4 519 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 NUP85Q9BW27 656 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 IFIH1Q9BYX4 1025 aaKnown RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 NYXQ9GZU5 481 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 S1PR5Q9H228 398 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 SLA2Q9H6Q3 261 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 PLEKHA2Q9HB19 425 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 SIRT7Q9NRC8 400 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZNF701Q9NV72 531 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 TRMT1Q9NXH9 659 aaKnown RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 CD207Q9UJ71 328 aa-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 LUC7L2Q9Y383 392 aaKnown RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 MRPS18CQ9Y3D5 142 aaKnown RBP-1.22□□□□□ -2.6
RNU6-542P-201ENST00000516405 SCN4AP35499 1836 aa-1.22□□□□□ -2.61
RNU6-542P-201ENST00000516405 PARD3Q8TEW0 1356 aa-1.22□□□□□ -2.61
RNU6-542P-201ENST00000516405 IQANK1A0A1B0GTG1 560 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 A0A1B0GWB2 263 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 FAM90A23PA8MXZ1 464 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 NBR2O15453 112 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 LRRTM2O43300 516 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 MMP1P03956 469 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 RHOXF2BP0C7M4 288 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 KRT13P13646 458 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 DARSP14868 501 aaKnown RBP-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 PKLRP30613 574 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 BRCC3P46736 316 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms