RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 ABRQ12979 859 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 CAMK2GQ13555 558 aaPredicted RBP16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 UGT8Q16880 541 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 PTCHD3Q3KNS1 767 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 UBE2UQ5VVX9 321 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 SLC8B1Q6J4K2 584 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 ZNF621Q6ZSS3 439 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 GPR155Q7Z3F1 870 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 ENTHD1Q8IYW4 607 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 CBARPQ8N350 705 aaPredicted RBP16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 GPR26Q8NDV2 337 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 CSGALNACT1Q8TDX6 532 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 HTR3EA5X5Y0 456 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 MAGEB17A8MXT2 336 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 PRAMEF4O60810 478 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 CD40LGP29965 261 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 EIF2DP41214 584 aaKnown RBP16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 SLC6A12P48065 614 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 PPP3CCP48454 512 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 ACLYP53396 1101 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 WNT3P56703 355 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 PRAMEF9Q5VWM5 478 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 FRG2Q64ET8 278 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 APCDD1Q8J025 514 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 MCFD2Q8NI22 146 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 DNASE1L2Q92874 299 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 FRG2BQ96QU4 278 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 SLC12A9Q9BXP2 914 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 ITPAQ9BY32 194 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 ANKHQ9HCJ1 492 aa16.3■□□□□ 0.2
TSPAN17-209ENST00000515708 E9PQ18 207 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 AOAHP28039 575 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 B4GALNT1Q00973 533 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 CAP1Q01518 475 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 SEMG2Q02383 582 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 IQCCQ4KMZ1 466 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 PDE12Q6L8Q7 609 aaKnown RBP16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 CYP2U1Q7Z449 544 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 ZSWIM9Q86XI8 627 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 SYT12Q8IV01 421 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 TCAIMQ8N3R3 496 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 RNF175Q8N4F7 328 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 KIAA1958Q8N8K9 716 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 HJURPQ8NCD3 748 aaPredicted RBP16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 PSMA8Q8TAA3 256 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 SLC38A4Q969I6 547 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 DACH2Q96NX9 599 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 DCSTAMPQ9H295 470 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 ELAC1Q9H777 363 aaKnown RBP16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 GPC6Q9Y625 555 aaPredicted RBP16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 NPIPB15A6NHN6 443 aaPredicted RBP16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 C9P02748 559 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 PRKAR2AP13861 404 aaKnown RBP16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 LIPAP38571 399 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 SMAD3P84022 425 aaKnown RBP16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 SRSF11Q05519 484 aaKnown RBP16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 PLD1Q13393 1074 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 SYT16Q17RD7 645 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 SKA2Q8WVK7 121 aaPredicted RBP16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 HRASLS5Q96KN8 279 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 ZBTB20Q9HC78 741 aaPredicted RBP16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 ZDHHC3Q9NYG2 299 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 KIAA1522Q9P206 1035 aaPredicted RBP16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 KLHL42Q9P2K6 505 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 SLC22A14Q9Y267 594 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 PCDHGA6Q9Y5G7 932 aa16.29■□□□□ 0.2
TSPAN17-209ENST00000515708 UPK3BL1B0FP48 263 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 UPK3BL2E5RIL1 263 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 SOCS5O75159 536 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 HIST1H2AGP0C0S8 130 aaPredicted RBP16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 HIST1H2ADP20671 130 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 ALDH7A1P49419 539 aaKnown RBP16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 CLK1P49759 484 aaKnown RBP16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 PRKCZQ05513 592 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 HSPA14Q0VDF9 509 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 RETSATQ6NUM9 610 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 CLECL1Q8IZS7 167 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 ASB11Q8WXH4 323 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 TPD52L3Q96J77 140 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 HIST1H2AHQ96KK5 128 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 C7orf34Q96L11 122 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 FCRL1Q96LA6 429 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 COPS8Q99627 209 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 HIST1H2AJQ99878 128 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 H2AFJQ9BTM1 129 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 C2orf49Q9BVC5 232 aaPredicted RBP16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 ANKMY1Q9P2S6 941 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.28■□□□□ 0.22e-9■■■■□ 19.8
TSPAN17-209ENST00000515708 ANAPC1Q9H1A4 1944 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 KRT87PA6NCN2 255 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 CPSF4O95639 269 aaKnown RBP16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 C8GP07360 202 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 COX7A2P14406 83 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 HNMTP50135 292 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 CSNK2BP67870 215 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 TUBA1BP68363 451 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 VEZF1Q14119 521 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 PRSS36Q5K4E3 855 aa16.28■□□□□ 0.2
TSPAN17-209ENST00000515708 TUBA1AQ71U36 451 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms