RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 WDR93Q6P2C0 686 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 RNF44Q7L0R7 432 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 THOC6Q86W42 341 aaKnown RBP13.36□□□□□ -0.27
USP46-209ENST00000514536 LRFN5Q96NI6 719 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 PARD6BQ9BYG5 372 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 PCMTD2Q9NV79 361 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 CD274Q9NZQ7 290 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 IL17BQ9UHF5 180 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 CROTQ9UKG9 612 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 SLC22A14Q9Y267 594 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 ITPR1Q14643 2758 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 H0YGG7 62 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 TAPBPO15533 448 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 S100BP04271 92 aaPredicted RBP13.35□□□□□ -0.27
USP46-209ENST00000514536 SHBGP04278 402 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 ALAS2P22557 587 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 F8A1P23610 371 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 RORAP35398 523 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 DLSTP36957 453 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 MAGEA12P43365 314 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 ARF3P61204 181 aaPredicted RBP13.35□□□□□ -0.27
USP46-209ENST00000514536 CSNK1G2P78368 415 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 VAC14Q08AM6 782 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 ACAP2Q15057 778 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 FBXO48Q5FWF7 155 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 ARHGAP40Q5TG30 622 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 C1orf189Q5VU69 101 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 SULT1C3Q6IMI6 304 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 DSELQ8IZU8 1212 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 PLD6Q8N2A8 252 aaKnown RBP13.35□□□□□ -0.27
USP46-209ENST00000514536 CT55Q8WUE5 264 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 ISL2Q96A47 359 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 ESAMQ96AP7 390 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 TSNARE1Q96NA8 513 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 ZNF285Q96NJ3 590 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 GPR78Q96P69 363 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 OR2A5Q96R48 311 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 ATOH8Q96SQ7 321 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 NDC1Q9BTX1 674 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 CHST8Q9H2A9 424 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 SYNPO2LQ9H987 977 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 TXLNGQ9NUQ3 528 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 ZNF358Q9NW07 568 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 WWOXQ9NZC7 414 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 DHCR7Q9UBM7 475 aaKnown RBP13.35□□□□□ -0.27
USP46-209ENST00000514536 DYRK1BQ9Y463 629 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 SNRNP200O75643 2136 aaKnown RBP13.35□□□□□ -0.27
USP46-209ENST00000514536 SPTBP11277 2137 aa13.35□□□□□ -0.27
USP46-209ENST00000514536 SUPT3HB4E1H0 165 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 K7ENP7 123 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 UBXN8O00124 270 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 KERAO60938 352 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 KATNA1O75449 491 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 SUPT3HO75486 399 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 WDR47O94967 919 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 EZRP15311 586 aaKnown RBP13.34□□□□□ -0.27
USP46-209ENST00000514536 HSD17B3P37058 310 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 HSPA7P48741 367 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 MEF2AQ02078 507 aaPredicted RBP13.34□□□□□ -0.27
USP46-209ENST00000514536 RELAQ04206 551 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 NAA30Q147X3 362 aaPredicted RBP13.34□□□□□ -0.27
USP46-209ENST00000514536 GRM7Q14831 915 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 CDKL4Q5MAI5 379 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 CATSPEREQ5SY80 951 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 RHBDD2Q6NTF9 364 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 KLC3Q6P597 504 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 INO80CQ6PI98 192 aaPredicted RBP13.34□□□□□ -0.27
USP46-209ENST00000514536 TCAIMQ8N3R3 496 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 TTC29Q8NA56 475 aaPredicted RBP13.34□□□□□ -0.27
USP46-209ENST00000514536 NEIL2Q969S2 332 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 RERGQ96A58 199 aaPredicted RBP13.34□□□□□ -0.27
USP46-209ENST00000514536 TMEM79Q9BSE2 394 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 PRORYQ9H606 182 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 FETUBQ9UGM5 382 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 TBK1Q9UHD2 729 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 PTBP2Q9UKA9 531 aaKnown RBP13.34□□□□□ -0.27
USP46-209ENST00000514536 SRPK3Q9UPE1 567 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 KCNE2Q9Y6J6 123 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 ANKRD12Q6UB98 2062 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 PCM1Q15154 2024 aa13.34□□□□□ -0.27
USP46-209ENST00000514536 IQANK1A0A1B0GTG1 560 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 FEZF1A0PJY2 475 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 HYKKA2RU49 373 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 TERTO14746 1132 aaKnown RBP13.33□□□□□ -0.28
USP46-209ENST00000514536 LCMT2O60294 686 aaKnown RBP13.33□□□□□ -0.28
USP46-209ENST00000514536 RFPL1O75677 317 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 GGT5P36269 586 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 SLC6A12P48065 614 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 CCR8P51685 355 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 ARSFP54793 590 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 DNASE1L3Q13609 305 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 FAM214AQ32MH5 1076 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 TIFABQ6ZNK6 161 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 TTLL10Q6ZVT0 673 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 KLHDC8AQ8IYD2 350 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 CSNK1A1LQ8N752 337 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 ZSCAN1Q8NBB4 408 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 PDPRQ8NCN5 879 aa13.33□□□□□ -0.28
USP46-209ENST00000514536 ABHD11Q8NFV4 315 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms