RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 PDP2Q9P2J9 529 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 IKZF3Q9UKT9 509 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 DYRK1BQ9Y463 629 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 A0A0J9YY10 115 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 EFCAB7A8K855 629 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 STK16O75716 305 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 UGT2B7P16662 529 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 GGT5P36269 586 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 PIK3CGP48736 1102 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 RAB15P59190 212 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 ASPHQ12797 758 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 DCAF12Q5T6F0 453 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 PRAMEF13Q5VWM6 474 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 LCTLQ6UWM7 567 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 PRSS42Q7Z5A4 293 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 C17orf64Q86WR6 236 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 IL22RA1Q8N6P7 574 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 BANPQ8N9N5 519 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 LMNTD1Q8N9Z9 388 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 ZUFSPQ96AP4 578 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 ATG10Q9H0Y0 220 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 MRPS30Q9NP92 439 aaKnown RBP19.39■□□□□ 0.69
USP53-208ENST00000514305 ZNF358Q9NW07 568 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 ANKMY1Q9P2S6 941 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 PTBP2Q9UKA9 531 aaKnown RBP19.39■□□□□ 0.69
USP53-208ENST00000514305 ANGPTL3Q9Y5C1 460 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 KCNE2Q9Y6J6 123 aa19.39■□□□□ 0.69
USP53-208ENST00000514305 B4E171 279 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 TARM1B6A8C7 271 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 STX16-NPEPL1H3BU86 382 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 UBXN8O00124 270 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 STX16O14662 325 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 ZBTB11O95625 1053 aaPredicted RBP19.38■□□□□ 0.69
USP53-208ENST00000514305 ANKRD34CP0C6C1 535 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 ATP5F1P24539 256 aaPredicted RBP19.38■□□□□ 0.69
USP53-208ENST00000514305 TSPAN7P41732 249 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 TBPL1P62380 186 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 PRDX1Q06830 199 aaKnown RBP19.38■□□□□ 0.69
USP53-208ENST00000514305 PFKFB4Q16877 469 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 TNFAIP8L3Q5GJ75 292 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 SNAP47Q5SQN1 464 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 FAM92BQ6ZTR7 304 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 LRRC70Q7Z2Q7 622 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 EXOC3L1Q86VI1 746 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 TAX1BP1Q86VP1 789 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 C2orf73Q8N5S3 287 aaPredicted RBP19.38■□□□□ 0.69
USP53-208ENST00000514305 TBC1D19Q8N5T2 526 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 TEFMQ96QE5 360 aaKnown RBP19.38■□□□□ 0.69
USP53-208ENST00000514305 OR2A14Q96R47 310 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 SGPP1Q9BX95 441 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 CD244Q9BZW8 370 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 FAM117AQ9C073 453 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 KLHL3Q9UH77 587 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 PLLPQ9Y342 182 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 HEMK1Q9Y5R4 338 aaPredicted RBP19.38■□□□□ 0.69
USP53-208ENST00000514305 B3GALT1Q9Y5Z6 326 aa19.38■□□□□ 0.69
USP53-208ENST00000514305 A8MU76 341 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 TM9SF1O15321 606 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 KLK8O60259 260 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 KATNA1O75449 491 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 WDR47O94967 919 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 MYL2P10916 166 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 SFTPCP11686 197 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 GMPRP36959 345 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 NFATC3Q12968 1075 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 FASTKQ14296 549 aaKnown RBP19.37■□□□□ 0.69
USP53-208ENST00000514305 SETDB1Q15047 1291 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 PTCHD3Q3KNS1 767 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 LINC00303Q3SY05 128 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 HSP90B2PQ58FF3 399 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 SUSD1Q6UWL2 747 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 MBOAT1Q6ZNC8 495 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 KLHDC8AQ8IYD2 350 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 EXD3Q8N9H8 876 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 PPFIBP2Q8ND30 876 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 NKD1Q969G9 470 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 PMEPA1Q969W9 287 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 MAP3K3Q99759 626 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 TWSG1Q9GZX9 223 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 PDE7BQ9NP56 450 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 KCNK9Q9NPC2 374 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 ABCF3Q9NUQ8 709 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 OCIAD1Q9NX40 245 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 SPHK1Q9NYA1 384 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 GPRC5BQ9NZH0 403 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 OPTCQ9UBM4 332 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 TAC3Q9UHF0 121 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 SNX7Q9UNH6 387 aa19.37■□□□□ 0.69
USP53-208ENST00000514305 HMGB1P1B2RPK0 211 aaPredicted RBP19.36■□□□□ 0.69
USP53-208ENST00000514305 CLGNO14967 610 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 SLC28A2O43868 658 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 PRICKLE3O43900 615 aaPredicted RBP19.36■□□□□ 0.69
USP53-208ENST00000514305 PLIN3O60664 434 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 ZWINTO95229 277 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 GNAZP19086 355 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 GRK3P35626 688 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 KCNC1P48547 511 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 GFERP55789 205 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 ICE2Q659A1 982 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 C16orf46Q6P387 395 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms