RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CATP04040 527 aaKnown RBP11.6□□□□□ -0.55
SNHG4-208ENST00000514110 EZRP15311 586 aaKnown RBP11.6□□□□□ -0.55
SNHG4-208ENST00000514110 PAMP19021 973 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 SOX11P35716 441 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 EFNA3P52797 238 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 SNRPNP63162 240 aaKnown RBP11.6□□□□□ -0.55
SNHG4-208ENST00000514110 CTBP1Q13363 440 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 CUL1Q13616 776 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 SYT16Q17RD7 645 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 ZNF470Q6ECI4 717 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 TTC27Q6P3X3 843 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 ZNF549Q6P9A3 640 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 FAM180AQ6UWF9 173 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 ZNF662Q6ZS27 426 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 NEK10Q6ZWH5 1172 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 PLD3Q8IV08 490 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 LRRC56Q8IYG6 542 aaPredicted RBP11.6□□□□□ -0.55
SNHG4-208ENST00000514110 SIRT6Q8N6T7 355 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 OR1N1Q8NGS0 311 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 BRIX1Q8TDN6 353 aaKnown RBP11.6□□□□□ -0.55
SNHG4-208ENST00000514110 ZNF669Q96BR6 464 aaPredicted RBP11.6□□□□□ -0.55
SNHG4-208ENST00000514110 MVB12AQ96EY5 273 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 MMABQ96EY8 250 aaPredicted RBP11.6□□□□□ -0.55
SNHG4-208ENST00000514110 SLX1AQ9BQ83 275 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 FBXO6Q9NRD1 293 aaPredicted RBP11.6□□□□□ -0.55
SNHG4-208ENST00000514110 FAM114A2Q9NRY5 505 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 HOMER3Q9NSC5 361 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 ABCF3Q9NUQ8 709 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 INTS10Q9NVR2 710 aaKnown RBP11.6□□□□□ -0.55
SNHG4-208ENST00000514110 PCYOX1Q9UHG3 505 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 CDC14AQ9UNH5 594 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 VPS9D1Q9Y2B5 631 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 ITPR2Q14571 2701 aa11.6□□□□□ -0.55
SNHG4-208ENST00000514110 NOTCH2Q04721 2471 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 A0A0A6YYC8 382 aaPredicted RBP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 ZCWPW2A0A1B0GU75 182 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 FAM237BA0A1B0GVD1 139 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 CTAGE9A4FU28 777 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 GOLGA8MH3BSY2 632 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 I3L1I5 382 aaPredicted RBP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 GFYI3L273 518 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 SMAPO00193 183 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 HAT1O14929 419 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 PRPF4O43172 522 aaKnown RBP eCLIP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 CCNDBP1O95273 360 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 SYF2O95926 243 aaKnown RBP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 F10P00742 488 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 KRT14P02533 472 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 STATHP02808 62 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 HEXBP07686 556 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 CCDC175P0C221 793 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 CXCR2P25025 360 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 HSD17B2P37059 387 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 TNFSF10P50591 281 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 ARG2P78540 354 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 SARNPP82979 210 aaKnown RBP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 MAT1AQ00266 395 aaKnown RBP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 DHX34Q14147 1143 aaKnown RBP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 GARNL3Q5VVW2 1013 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 ARMC3Q5W041 872 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 RPUSD3Q6P087 351 aaKnown RBP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 CYHR1Q6ZMK1 362 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 ZC3H7AQ8IWR0 971 aaKnown RBP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 SHISA5Q8N114 240 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 AGGF1Q8N302 714 aaeCLIP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 FBXO15Q8NCQ5 510 aaPredicted RBP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 TRIM58Q8NG06 486 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 ASB11Q8WXH4 323 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 RERGQ96A58 199 aaPredicted RBP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 TAAR6Q96RI8 345 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 TGIF2Q9GZN2 237 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 DRC3Q9H069 523 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 ZNF700Q9H0M5 742 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 MKKSQ9NPJ1 570 aaPredicted RBP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 C14orf105Q9NVL8 296 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 SAMD15Q9P1V8 674 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 MRPS2Q9Y399 296 aaKnown RBP11.59□□□□□ -0.55
SNHG4-208ENST00000514110 CENPEQ02224 2701 aa11.59□□□□□ -0.55
SNHG4-208ENST00000514110 HEATR5BQ9P2D3 2071 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 LOC102723996A0A087X1L8 192 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 SDR42E2A6NKP2 422 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 ZNF839A8K0R7 811 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 H7BY64 318 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 BMP10O95393 424 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 SERPINA7P05543 415 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 ANXA5P08758 320 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 MPC1LP0DKB6 136 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 ITGAMP11215 1152 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 MLNP12872 115 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 FDXRP22570 491 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 SKIV2L2P42285 1042 aaKnown RBP11.58□□□□□ -0.56
SNHG4-208ENST00000514110 SLC1A2P43004 574 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 ABATP80404 500 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 RELAQ04206 551 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 THOC5Q13769 683 aaKnown RBP11.58□□□□□ -0.56
SNHG4-208ENST00000514110 PCOLCEQ15113 449 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 TTLL9Q3SXZ7 439 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 ZNF324BQ6AW86 544 aaPredicted RBP11.58□□□□□ -0.56
SNHG4-208ENST00000514110 TMEM205Q6UW68 189 aa11.58□□□□□ -0.56
SNHG4-208ENST00000514110 PIWIL4Q7Z3Z4 852 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms