RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 MPC1LP0DKB6 136 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 ABATP80404 500 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 TAP2Q03519 686 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 DSG2Q14126 1118 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 TLR1Q15399 786 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 NDUFA9Q16795 377 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 LONRF1Q17RB8 773 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 GARNL3Q5VVW2 1013 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 ATG9BQ674R7 924 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 CCDC137Q6PK04 289 aaKnown RBP14.64□□□□□ -0.07
TPM3-219ENST00000509409 UBE2R2Q712K3 238 aaPredicted RBP14.64□□□□□ -0.07
TPM3-219ENST00000509409 KCNMB4Q86W47 210 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 SPNS2Q8IVW8 549 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 CATSPER1Q8NEC5 780 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 CALML6Q8TD86 181 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 ZNF480Q8WV37 535 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 ASB11Q8WXH4 323 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 MVB12AQ96EY5 273 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 SERPINB12Q96P63 405 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 NAP1L3Q99457 506 aaPredicted RBP14.64□□□□□ -0.07
TPM3-219ENST00000509409 GPR21Q99679 349 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 EBNA1BP2Q99848 306 aaKnown RBP14.64□□□□□ -0.07
TPM3-219ENST00000509409 PTGFRNQ9P2B2 879 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 DHRS7Q9Y394 339 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 ICE1Q9Y2F5 2266 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 ANKRD12Q6UB98 2062 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 A0A0A6YYC8 382 aaPredicted RBP14.63□□□□□ -0.07
TPM3-219ENST00000509409 IGKV1-8A0A0C4DH67 115 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 ZCWPW2A0A1B0GU75 182 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 IDSB3KWA1 339 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 H7BY64 318 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 I3L1I5 382 aaPredicted RBP14.63□□□□□ -0.07
TPM3-219ENST00000509409 WFS1O76024 890 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 KLHL18O94889 574 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 ENO3P13929 434 aaPredicted RBP14.63□□□□□ -0.07
TPM3-219ENST00000509409 EZRP15311 586 aaKnown RBP14.63□□□□□ -0.07
TPM3-219ENST00000509409 SLC1A2P43004 574 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 TSFMP43897 325 aaKnown RBP14.63□□□□□ -0.07
TPM3-219ENST00000509409 ARG2P78540 354 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 EEF1A2Q05639 463 aaKnown RBP14.63□□□□□ -0.07
TPM3-219ENST00000509409 MFAP5Q13361 173 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 ZNF425Q6IV72 752 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 ZNF549Q6P9A3 640 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 CYHR1Q6ZMK1 362 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 MAMDC2Q7Z304 686 aaPredicted RBP14.63□□□□□ -0.07
TPM3-219ENST00000509409 PLD3Q8IV08 490 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 RASGEF1CQ8N431 466 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 ST6GALNAC3Q8NDV1 305 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 OR1N1Q8NGS0 311 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 GIMAP7Q8NHV1 300 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 GRHL3Q8TE85 626 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 KCNJ9Q92806 393 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 MAGEB10Q96LZ2 347 aaPredicted RBP14.63□□□□□ -0.07
TPM3-219ENST00000509409 PRAP1Q96NZ9 151 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 OR2A5Q96R48 311 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 MKKSQ9NPJ1 570 aaPredicted RBP14.63□□□□□ -0.07
TPM3-219ENST00000509409 IARS2Q9NSE4 1012 aaKnown RBP14.63□□□□□ -0.07
TPM3-219ENST00000509409 C14orf105Q9NVL8 296 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 PLA2G3Q9NZ20 509 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 FBXO5Q9UKT4 447 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 JRKLQ9Y4A0 524 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 COMMD10Q9Y6G5 202 aa14.63□□□□□ -0.07
TPM3-219ENST00000509409 SPTAN1Q13813 2472 aaKnown RBP14.63□□□□□ -0.07
TPM3-219ENST00000509409 SPTBN1Q01082 2364 aaKnown RBP14.62□□□□□ -0.07
TPM3-219ENST00000509409 IGLV3-12A0A075B6K2 115 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 DYTNA2CJ06 578 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 HAT1O14929 419 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 HAUS5O94927 633 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 LDLRP01130 860 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 PRR35P0CG20 571 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 COL8A1P27658 744 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 SLC26A3P40879 764 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 AVPR1BP47901 424 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 CCZ1BP86790 482 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 CCZ1P86791 482 aaPredicted RBP14.62□□□□□ -0.07
TPM3-219ENST00000509409 MPP1Q00013 466 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 HSP90AA5PQ58FG0 334 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 B3GNTL1Q67FW5 361 aaPredicted RBP14.62□□□□□ -0.07
TPM3-219ENST00000509409 UGT3A1Q6NUS8 523 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 FAM180AQ6UWF9 173 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 PALM2Q8IXS6 379 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 LMNTD2Q8IXW0 634 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 CPNE9Q8IYJ1 553 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 FBXO15Q8NCQ5 510 aaPredicted RBP14.62□□□□□ -0.07
TPM3-219ENST00000509409 BRIX1Q8TDN6 353 aaKnown RBP14.62□□□□□ -0.07
TPM3-219ENST00000509409 GRK7Q8WTQ7 553 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 BARD1Q99728 777 aaKnown RBP14.62□□□□□ -0.07
TPM3-219ENST00000509409 DRC3Q9H069 523 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 MKL2Q9ULH7 1088 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 OSGIN2Q9Y236 505 aa14.62□□□□□ -0.07
TPM3-219ENST00000509409 WIPF3A6NGB9 483 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 GFYI3L273 518 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 FOXS1O43638 330 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 STATHP02808 62 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 SERPINA7P05543 415 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 COX6A1P12074 109 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 MAT1AQ00266 395 aaKnown RBP14.61□□□□□ -0.07
TPM3-219ENST00000509409 RELAQ04206 551 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 PTK6Q13882 451 aa14.61□□□□□ -0.07
TPM3-219ENST00000509409 SYT16Q17RD7 645 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms