RNA–Protein interactions for RNA: ENST00000509085.5

HMGCR-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best)

Gene HMGCR, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-207ENST00000509085 RPS3P23396 243 aaKnown RBP eCLIP8.3□□□□□ -1.083e-7■■■□□ 16.5
HMGCR-207ENST00000509085 STIP1P31948 543 aaKnown RBP8.3□□□□□ -1.08
HMGCR-207ENST00000509085 RPA3P35244 121 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-207ENST00000509085 FDFT1P37268 417 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 BDKRB1P46663 353 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 AVPR1BP47901 424 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 AGTR2P50052 363 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 GDF10P55107 478 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 ARF3P61204 181 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-207ENST00000509085 TBX2Q13207 712 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-207ENST00000509085 TESK1Q15569 626 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 C3AR1Q16581 482 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 ANKRD20A4Q4UJ75 823 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 PLAG1Q6DJT9 500 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 FAAH2Q6GMR7 532 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 NEK10Q6ZWH5 1172 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 CDH24Q86UP0 819 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 ZC3H7AQ8IWR0 971 aaKnown RBP8.3□□□□□ -1.08
HMGCR-207ENST00000509085 ZNF295-AS1Q8N0V1 137 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 KRT222Q8N1A0 295 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 DTWD1Q8N5C7 304 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 HORMAD2Q8N7B1 307 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 UBL4BQ8N7F7 174 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 AMER3Q8N944 861 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 TMEM178AQ8NBL3 297 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 PPHLN1Q8NEY8 458 aaKnown RBP8.3□□□□□ -1.08
HMGCR-207ENST00000509085 SLC35B2Q8TB61 432 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 SMPDL3AQ92484 453 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 ALG3Q92685 438 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 GPR137Q96N19 417 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 PANX2Q96RD6 677 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 TMEM121Q9BTD3 319 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 FRMD8P1Q9BZ68 369 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-207ENST00000509085 P2RY12Q9H244 342 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 MRPS30Q9NP92 439 aaKnown RBP8.3□□□□□ -1.08
HMGCR-207ENST00000509085 SLC2A6Q9UGQ3 507 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 MKL2Q9ULH7 1088 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 RUVBL1Q9Y265 456 aaKnown RBP8.3□□□□□ -1.08
HMGCR-207ENST00000509085 MEMO1Q9Y316 297 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 TCAF1Q9Y4C2 921 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 DCHS2Q6V1P9 2916 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 SCN2AQ99250 2005 aa8.3□□□□□ -1.08
HMGCR-207ENST00000509085 ITPR3Q14573 2671 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 ASPDHA6ND91 283 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 H0YIG0 161 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 AP3B1O00203 1094 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 CD3EAPO15446 510 aaKnown RBP8.29□□□□□ -1.08
HMGCR-207ENST00000509085 NDUFS3O75489 264 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 F10P00742 488 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 CD46P15529 392 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 CD1EP15812 388 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 EEF1DP29692 281 aaKnown RBP8.29□□□□□ -1.08
HMGCR-207ENST00000509085 NAP1L1P55209 391 aaKnown RBP8.29□□□□□ -1.08
HMGCR-207ENST00000509085 ABATP80404 500 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 ALDH6A1Q02252 535 aaKnown RBP8.29□□□□□ -1.08
HMGCR-207ENST00000509085 KLF1Q13351 362 aaPredicted RBP8.29□□□□□ -1.08
HMGCR-207ENST00000509085 PTK6Q13882 451 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 SEMA3AQ14563 771 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 EXT1Q16394 746 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 MEP1AQ16819 746 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 RNF187Q5TA31 235 aaPredicted RBP8.29□□□□□ -1.08
HMGCR-207ENST00000509085 H3F3CQ6NXT2 135 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 FBXO42Q6P3S6 717 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 LRRC8BQ6P9F7 803 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 CPEB2Q7Z5Q1 589 aaKnown RBP8.29□□□□□ -1.08
HMGCR-207ENST00000509085 PAQR7Q86WK9 346 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 SPPL2CQ8IUH8 684 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 CEP97Q8IW35 865 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 LGI4Q8N135 537 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 GHDCQ8N2G8 530 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 MDS2Q8NDY4 140 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 OR9A1PQ8NGU1 263 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 MCOLN3Q8TDD5 553 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 OR2A5Q96R48 311 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 EBNA1BP2Q99848 306 aaKnown RBP8.29□□□□□ -1.08
HMGCR-207ENST00000509085 UTP23Q9BRU9 249 aaKnown RBP8.29□□□□□ -1.08
HMGCR-207ENST00000509085 ENKD1Q9H0I2 346 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 MCCC2Q9HCC0 563 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 TINAGQ9UJW2 476 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 NFS1Q9Y697 457 aa8.29□□□□□ -1.08
HMGCR-207ENST00000509085 A0A0A6YYC8 382 aaPredicted RBP8.28□□□□□ -1.08
HMGCR-207ENST00000509085 E9PLN8 166 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 I3L1I5 382 aaPredicted RBP8.28□□□□□ -1.08
HMGCR-207ENST00000509085 MYO1CO00159 1063 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 FOXS1O43638 330 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 NRP2O60462 931 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 MATN4O95460 622 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 NSA2O95478 260 aaKnown RBP8.28□□□□□ -1.08
HMGCR-207ENST00000509085 CATP04040 527 aaKnown RBP8.28□□□□□ -1.08
HMGCR-207ENST00000509085 CELA2AP08217 269 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 ABOP16442 354 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 HRH2P25021 359 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 ADARP55265 1226 aaKnown RBP8.28□□□□□ -1.08
HMGCR-207ENST00000509085 PMP22Q01453 160 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 TLE4Q04727 773 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 PRDX1Q06830 199 aaKnown RBP8.28□□□□□ -1.08
HMGCR-207ENST00000509085 HKDC1Q2TB90 917 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 BTBD16Q32M84 506 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 CCSMST1Q4G0I0 132 aa8.28□□□□□ -1.08
HMGCR-207ENST00000509085 PCID2Q5JVF3 399 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms