RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 FBLP22087 321 aaKnown RBP13.6□□□□□ -0.23
RAB28-205ENST00000508274 CARSP49589 748 aaKnown RBP13.6□□□□□ -0.23
RAB28-205ENST00000508274 GNG11P61952 73 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 TBPL1P62380 186 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 AIMP2Q13155 320 aaKnown RBP13.6□□□□□ -0.23
RAB28-205ENST00000508274 RBBP7Q16576 425 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 VWA2Q5GFL6 755 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 SPANXN3Q5MJ09 141 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 THEMIS2Q5TEJ8 643 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 PRMT9Q6P2P2 845 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 PAQR3Q6TCH7 311 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 PCGF5Q86SE9 256 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 LAPTM4BQ86VI4 370 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 HPS6Q86YV9 775 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 CNTN4Q8IWV2 1026 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 ARHGEF39Q8N4T4 335 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 MIEF2Q96C03 454 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 CERS2Q96G23 380 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 CFAP36Q96G28 342 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 CRB3Q9BUF7 120 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 ZNF282Q9UDV7 671 aaPredicted RBP13.6□□□□□ -0.23
RAB28-205ENST00000508274 PYCARDQ9ULZ3 195 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 VPS4AQ9UN37 437 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 CHMP2BQ9UQN3 213 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 SH2B3Q9UQQ2 575 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 PDE10AQ9Y233 779 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 CSAG2Q9Y5P2 127 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 CNTRLQ7Z7A1 2325 aa13.6□□□□□ -0.23
RAB28-205ENST00000508274 SCN3AQ9NY46 2000 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 H7BY64 318 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 TTC4O95801 387 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 EZRP15311 586 aaKnown RBP13.59□□□□□ -0.23
RAB28-205ENST00000508274 ELK3P41970 407 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 SOX8P57073 446 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 PLEKHN1Q494U1 663 aaPredicted RBP13.59□□□□□ -0.23
RAB28-205ENST00000508274 PRAMEF13Q5VWM6 474 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 TRMT10BQ6PF06 316 aaKnown RBP13.59□□□□□ -0.23
RAB28-205ENST00000508274 GALNT11Q8NCW6 608 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 OR11G2Q8NGC1 345 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 NACC2Q96BF6 587 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 C8orf44Q96CB5 159 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 PRAP1Q96NZ9 151 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 SEMA3GQ9NS98 782 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 TAS2R13Q9NYV9 303 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 MAP10Q9P2G4 905 aa13.59□□□□□ -0.23
RAB28-205ENST00000508274 MRPS2Q9Y399 296 aaKnown RBP13.59□□□□□ -0.23
RAB28-205ENST00000508274 EIF3FO00303 357 aaPredicted RBP13.58□□□□□ -0.23
RAB28-205ENST00000508274 TTI1O43156 1089 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 ALPPP05187 535 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 ABATP80404 500 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 DR1Q01658 176 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 OCA2Q04671 838 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 Q0VFX4 171 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 MORF4L2Q15014 288 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 PHKG1Q16816 387 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 SYT16Q17RD7 645 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 TUBB8Q3ZCM7 444 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 TEDDM1Q5T9Z0 273 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 UGT3A1Q6NUS8 523 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 HIBCHQ6NVY1 386 aaPredicted RBP13.58□□□□□ -0.23
RAB28-205ENST00000508274 PARP9Q8IXQ6 854 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 SHISA5Q8N114 240 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 FAM26EQ8N5C1 309 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 AMER3Q8N944 861 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 RERGQ96A58 199 aaPredicted RBP13.58□□□□□ -0.23
RAB28-205ENST00000508274 C19orf60Q96EN9 201 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 LINGO1Q96FE5 620 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 YIPF2Q9BWQ6 316 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 TRIM31Q9BZY9 425 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 ATG10Q9H0Y0 220 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 PPANQ9NQ55 473 aaKnown RBP13.58□□□□□ -0.23
RAB28-205ENST00000508274 CCDC177Q9NQR7 707 aaPredicted RBP13.58□□□□□ -0.23
RAB28-205ENST00000508274 C3orf18Q9UK00 162 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 B3GNT3Q9Y2A9 372 aa13.58□□□□□ -0.23
RAB28-205ENST00000508274 USP9YO00507 2555 aaPredicted RBP13.58□□□□□ -0.24
RAB28-205ENST00000508274 IGLV3-12A0A075B6K2 115 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 A0A0A6YYC8 382 aaPredicted RBP13.58□□□□□ -0.24
RAB28-205ENST00000508274 I3L1I5 382 aaPredicted RBP13.58□□□□□ -0.24
RAB28-205ENST00000508274 TP73O15350 636 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 FOXS1O43638 330 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 TSPAN12O95859 305 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 RGS4P49798 205 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 ITGA8P53708 1063 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 EMP3P54852 163 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 MRPL49Q13405 166 aaKnown RBP13.58□□□□□ -0.24
RAB28-205ENST00000508274 HIF1AQ16665 826 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 IGFL3Q6UXB1 125 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 KIAA0408Q6ZU52 694 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 GPATCH11Q8N954 259 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 ALKBH8Q96BT7 664 aaKnown RBP13.58□□□□□ -0.24
RAB28-205ENST00000508274 SNRNP40Q96DI7 357 aaKnown RBP13.58□□□□□ -0.24
RAB28-205ENST00000508274 MMABQ96EY8 250 aaPredicted RBP13.58□□□□□ -0.24
RAB28-205ENST00000508274 PDLIM2Q96JY6 352 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 NAPGQ99747 312 aaPredicted RBP13.58□□□□□ -0.24
RAB28-205ENST00000508274 OLFM1Q99784 485 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 MACROD1Q9BQ69 325 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 NAT9Q9BTE0 207 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 UTP6Q9NYH9 597 aaKnown RBP13.58□□□□□ -0.24
RAB28-205ENST00000508274 TRPC4Q9UBN4 977 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 SAR1BQ9Y6B6 198 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms