RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 HLA-DQB2P05538 268 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ABCB1P08183 1280 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SRPRAP08240 638 aaKnown RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 FTH1P19P0C7X4 201 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 PRR35P0CG20 571 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 PGAM1P18669 254 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 KRT4P19013 534 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 HLA-DPA1P20036 260 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TAC1P20366 129 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 FOXN2P32314 431 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TRHRP34981 398 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 RPA3P35244 121 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ADRA1AP35348 466 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 BLVRAP53004 296 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 PTTG1IPP53801 180 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 CTXN1P60606 82 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 AP1S1P61966 158 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ZXDBP98169 803 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ZP2Q05996 745 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 DLX2Q07687 328 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SF3A3Q12874 501 aaKnown RBP eCLIP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SYCE2Q6PIF2 218 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SLC2A7Q6PXP3 512 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TRPM8Q7Z2W7 1104 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 MFSD6LQ8IWD5 586 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 CFAP52Q8N1V2 620 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 BANPQ8N9N5 519 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 GIMAP7Q8NHV1 300 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 B4GALNT2Q8NHY0 566 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ZNF671Q8TAW3 534 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 DCAKDQ8WVC6 231 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SGK3Q96BR1 496 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SIGLEC10Q96LC7 697 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 CYTH2Q99418 400 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 PRRX2Q99811 253 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 EBNA1BP2Q99848 306 aaKnown RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TBL1YQ9BQ87 522 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 BCO1Q9HAY6 547 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ZFP14Q9HCL3 533 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SPATA6Q9NWH7 488 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SLC25A13Q9UJS0 675 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TMEM5Q9Y2B1 443 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SPTBN5Q9NRC6 3674 aaKnown RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 DOCK6Q96HP0 2047 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 TCF20Q9UGU0 1960 aaKnown RBP6.92□□□□□ -1.3
CLCN3-206ENST00000507875 FAM237BA0A1B0GVD1 139 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 NPIPB15A6NHN6 443 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-206ENST00000507875 VILLO15195 856 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 LINC01565O15544 149 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 NRP2O60462 931 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 PIAS1O75925 651 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 PAPSS2O95340 614 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-206ENST00000507875 FGF1P05230 155 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 SERPINF2P08697 491 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 DDX5P17844 614 aaKnown RBP6.92□□□□□ -1.3
CLCN3-206ENST00000507875 ACVR2AP27037 513 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 PCP4P48539 62 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 FCHO2Q0JRZ9 810 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 BOP1Q14137 746 aaKnown RBP6.92□□□□□ -1.3
CLCN3-206ENST00000507875 CR1LQ2VPA4 569 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 CYP27C1Q4G0S4 372 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 PLA1AQ53H76 456 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 TMEM31Q5JXX7 168 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 KLC3Q6P597 504 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 LINC00346Q8IVM7 164 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 ITFG1Q8TB96 612 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 HCAR2Q8TDS4 363 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 MZB1Q8WU39 189 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 GRAMD1AQ96CP6 724 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 STAMBPL1Q96FJ0 436 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 ABHD1Q96SE0 405 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 MLPHQ9BV36 600 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-206ENST00000507875 PITPNM3Q9BZ71 974 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 C7orf69Q9H7B7 122 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 LANCL2Q9NS86 450 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 DUS2Q9NX74 493 aaKnown RBP6.92□□□□□ -1.3
CLCN3-206ENST00000507875 SLC8A2Q9UPR5 921 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 NAALAD2Q9Y3Q0 740 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 MUC22E2RYF6 1773 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-206ENST00000507875 MYLKQ15746 1914 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 A0A0U1RQK1 487 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 LOC285095A0A1B0GVY8 99 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 A0A1W2PQ09 198 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 ZNF320A2RRD8 509 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 J3KR12 359 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 NVLO15381 856 aaKnown RBP6.92□□□□□ -1.3
CLCN3-206ENST00000507875 YKT6O15498 198 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 HNRNPRO43390 633 aaKnown RBP6.92□□□□□ -1.3
CLCN3-206ENST00000507875 DCXO43602 365 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 VPS4BO75351 444 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 OR5F1O95221 314 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 ZWINTO95229 277 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 PRAMEF12O95522 483 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 CER1O95813 267 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 CLEC3BP05452 202 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 COL4A2P08572 1712 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 DLDP09622 509 aaKnown RBP6.92□□□□□ -1.3
CLCN3-206ENST00000507875 GJA1P17302 382 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 CR2P20023 1033 aa6.92□□□□□ -1.3
CLCN3-206ENST00000507875 EPHA8P29322 1005 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms