RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 C21orf140B9A014 251 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 CCL22O00626 93 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 GYG2O15488 501 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 NKX2-8O15522 239 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 HAUS5O94927 633 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 IFNB1P01574 187 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 FTH1P02794 183 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 OR56A5P0C7T3 313 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 FOLR1P15328 257 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 ZNF28P17035 718 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 TCN2P20062 427 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 COILP38432 576 aaPredicted RBP7.76□□□□□ -1.17
SCN1A-207ENST00000507401 RPL5P46777 297 aaKnown RBP7.76□□□□□ -1.17
SCN1A-207ENST00000507401 MED21Q13503 144 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 TUBB3Q13509 450 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 BOP1Q14137 746 aaKnown RBP7.76□□□□□ -1.17
SCN1A-207ENST00000507401 SEPT6Q14141 434 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 PDCD4Q53EL6 469 aaKnown RBP7.76□□□□□ -1.17
SCN1A-207ENST00000507401 CFAP157Q5JU67 520 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 TSTD2Q5T7W7 516 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 SAMD5Q5TGI4 173 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 ARMC3Q5W041 872 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 CCDC137Q6PK04 289 aaKnown RBP7.76□□□□□ -1.17
SCN1A-207ENST00000507401 C3orf62Q6ZUJ4 267 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 CLNKQ7Z7G1 428 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 SPATA24Q86W54 205 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 CLDN19Q8N6F1 224 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 CCDC89Q8N998 374 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 OR4E2Q8NGC2 313 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 OR13J1Q8NGT2 312 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 OR4L1Q8NH43 312 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 C10orf82Q8WW14 230 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 C1orf54Q8WWF1 131 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 LCN9Q8WX39 176 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 ATG4AQ8WYN0 398 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 TFGQ92734 400 aaPredicted RBP7.76□□□□□ -1.17
SCN1A-207ENST00000507401 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.76□□□□□ -1.17
SCN1A-207ENST00000507401 LRFN5Q96NI6 719 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 FERD3LQ96RJ6 166 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 ECSITQ9BQ95 431 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 GPR87Q9BY21 358 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 TRIM55Q9BYV6 548 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 SLC25A18Q9H1K4 315 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 SRMSQ9H3Y6 488 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 EIF2B3Q9NR50 452 aaKnown RBP7.76□□□□□ -1.17
SCN1A-207ENST00000507401 LATS2Q9NRM7 1088 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 FGF21Q9NSA1 209 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 IL17BQ9UHF5 180 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 POLG2Q9UHN1 485 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 GDF2Q9UK05 429 aaPredicted RBP7.76□□□□□ -1.17
SCN1A-207ENST00000507401 BTRCQ9Y297 605 aa7.76□□□□□ -1.17
SCN1A-207ENST00000507401 CFAP20Q9Y6A4 193 aaKnown RBP7.76□□□□□ -1.17
SCN1A-207ENST00000507401 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.76□□□□□ -1.17
SCN1A-207ENST00000507401 PIKFYVEQ9Y2I7 2098 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 TLN1Q9Y490 2541 aaKnown RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 A8MUI8 341 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 H3BNX3 289 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 J3QKU1 62 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 GSC2O15499 205 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 KDM1AO60341 852 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 ATP6V1G1O75348 118 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 APRTP07741 180 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 FAM87AP0C7U9 286 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 FAM157BP0CG42 384 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 PRSS56P0CW18 603 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 BMP4P12644 408 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 F8A1P23610 371 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 ACADLP28330 430 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 PDHA2P29803 388 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 PRDX3P30048 256 aaKnown RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 FOXN2P32314 431 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 RPL22P35268 128 aaKnown RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 DLSTP36957 453 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 RPL21P46778 160 aaKnown RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 NPY2RP49146 381 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 KPNA2P52292 529 aaKnown RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 PPP1CAP62136 330 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 SNRPNP63162 240 aaKnown RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 HPCAP84074 193 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 CDK16Q00536 496 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 PTK6Q13882 451 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 SIX1Q15475 284 aaPredicted RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 ARSJQ5FYB0 599 aaPredicted RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 AARS2Q5JTZ9 985 aaKnown RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 PCID2Q5JVF3 399 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 PWWP2BQ6NUJ5 590 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 DUS1LQ6P1R4 473 aaKnown RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 AFTPHQ6ULP2 937 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 ZNF517Q6ZMY9 492 aaPredicted RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 SLCO4C1Q6ZQN7 724 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 AMIGO1Q86WK6 493 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 TBC1D21Q8IYX1 336 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 UNC5BQ8IZJ1 945 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 LILRA3Q8N6C8 439 aaPredicted RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 GALNT6Q8NCL4 622 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 PHC3Q8NDX5 983 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 RAB3IL1Q8TBN0 382 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 EPS8L3Q8TE67 593 aaKnown RBP7.75□□□□□ -1.17
SCN1A-207ENST00000507401 DENND1AQ8TEH3 1009 aa7.75□□□□□ -1.17
SCN1A-207ENST00000507401 APOBEC4Q8WW27 367 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms