RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 ERVK-10P10266 1014 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 IRF2P14316 349 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 CA6P23280 308 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 SQLEQ14534 574 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 PHKG1Q16816 387 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 HYAL4Q2M3T9 481 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 SPDYCQ5MJ68 293 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 FAM53AQ6NSI3 398 aaPredicted RBP3.15□□□□□ -1.91
SSBP2-206ENST00000506960 THNSL1Q8IYQ7 743 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 MAML2Q8IZL2 1156 aaPredicted RBP3.15□□□□□ -1.91
SSBP2-206ENST00000506960 LGI2Q8N0V4 545 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 TMEM178AQ8NBL3 297 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 PHLDA1Q8WV24 401 aaPredicted RBP3.15□□□□□ -1.91
SSBP2-206ENST00000506960 GIMAP5Q96F15 307 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 LRR1Q96L50 414 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 RMDN2Q96LZ7 410 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 FER1L6-AS2Q96M78 137 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 FAM20AQ96MK3 541 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 RAB3IPQ96QF0 476 aaPredicted RBP3.15□□□□□ -1.91
SSBP2-206ENST00000506960 CHST11Q9NPF2 352 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 PPANQ9NQ55 473 aaKnown RBP3.15□□□□□ -1.91
SSBP2-206ENST00000506960 P4HTMQ9NXG6 502 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 SPHKAPQ2M3C7 1700 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 AFF2P51816 1311 aa3.15□□□□□ -1.91
SSBP2-206ENST00000506960 GREB1LQ9C091 1923 aaPredicted RBP3.15□□□□□ -1.91
SSBP2-206ENST00000506960 ASXL1Q8IXJ9 1541 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 FAM135BQ49AJ0 1406 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 ARPC2O15144 300 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 TBCAO75347 108 aaKnown RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 RPS6KA5O75582 802 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 RECQL5O94762 991 aaPredicted RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 CD48P09326 243 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 FRMD6-AS1P0C7T7 363 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 IGHV4-31P0DP07 118 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 SAGP10523 405 aaPredicted RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 DARSP14868 501 aaKnown RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 PTAFRP25105 342 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 CSTF2P33240 577 aaKnown RBP eCLIP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 PTGER4P35408 488 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 NPY4RP50391 375 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 ZNF41P51814 821 aaPredicted RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 B3GALT5-AS1P59052 145 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 KLC1Q07866 573 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 TAF10Q12962 218 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 HNRNPDQ14103 355 aaKnown RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 P2RY6Q15077 328 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 UGT3A2Q3SY77 523 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 CYP4A22Q5TCH4 519 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 ENPP7Q6UWV6 458 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 FAM47EQ6ZV65 393 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 ERN2Q76MJ5 926 aaKnown RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 CCAR2Q8N163 923 aaKnown RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 RAB42Q8N4Z0 105 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 MAPKAPK5-AS1Q8N8E1 139 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 NIPA2Q8N8Q9 360 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 OR4K1Q8NGD4 311 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 OR52N5Q8NH56 324 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 VANGL1Q8TAA9 524 aaPredicted RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 OLIG1Q8TAK6 271 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 KCNE4Q8WWG9 221 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 TMEM190Q8WZ59 177 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 PIGBQ92521 554 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 PROX1Q92786 737 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 EXT2Q93063 718 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 ZNF599Q96NL3 588 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 SPAG5Q96R06 1193 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 FNBP1Q96RU3 617 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 FEVQ99581 238 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 FERMT1Q9BQL6 677 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 FN3KQ9H479 309 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 ZNF701Q9NV72 531 aaPredicted RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 INTS9Q9NV88 658 aaKnown RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 TXNDC16Q9P2K2 825 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 C19orf25Q9UFG5 118 aaPredicted RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 POLLQ9UGP5 575 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 KAT6BQ8WYB5 2073 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 ERVK-7P63135 1459 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 ABCC3O15438 1527 aa3.14□□□□□ -1.91
SSBP2-206ENST00000506960 PRDM15P57071 1507 aaPredicted RBP3.14□□□□□ -1.91
SSBP2-206ENST00000506960 NRKQ7Z2Y5 1582 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 C2orf81A6NN90 581 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 PTGESO14684 152 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 HSPA4LO95757 839 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 EML2O95834 649 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 GNB3P16520 340 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 WNT5AP41221 380 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 MAGEA11P43364 429 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 UBASH3AP57075 661 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 SNRPD1P62314 119 aaKnown RBP3.13□□□□□ -1.91
SSBP2-206ENST00000506960 POLR2LP62875 67 aaKnown RBP3.13□□□□□ -1.91
SSBP2-206ENST00000506960 ITGA7Q13683 1181 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 NPTX1Q15818 432 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 LPAL2Q16609 132 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 FAM133BQ5BKY9 247 aaKnown RBP3.13□□□□□ -1.91
SSBP2-206ENST00000506960 SLC25A53Q5H9E4 307 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 SLC35D3Q5M8T2 416 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 C20orf194Q5TEA3 1177 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 SHQ1Q6PI26 577 aaKnown RBP3.13□□□□□ -1.91
SSBP2-206ENST00000506960 C11orf57Q6ZUT1 292 aaPredicted RBP3.13□□□□□ -1.91
SSBP2-206ENST00000506960 SH2D6Q7Z4S9 175 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms