RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 TEDDM1Q5T9Z0 273 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 GARNL3Q5VVW2 1013 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 TRMT10BQ6PF06 316 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 PAQR3Q6TCH7 311 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 IGFL3Q6UXB1 125 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 GALNT16Q8N428 558 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 METTL27Q8N6F8 245 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 RBMXL3Q8N7X1 1067 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 Q8NA96 180 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 CLEC1AQ8NC01 280 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 GABPB2Q8TAK5 448 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 MVB12AQ96EY5 273 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 ZNF552Q9H707 407 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 ZNF304Q9HCX3 659 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 CUEDC1Q9NWM3 386 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 STOX2Q9P2F5 926 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 SLC17A6Q9P2U8 582 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 RNF14Q9UBS8 474 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 CORO1CQ9ULV4 474 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 G3BP2Q9UN86 482 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 CHMP2BQ9UQN3 213 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 PLAAQ9Y263 795 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 HS3ST3B1Q9Y662 390 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 DOPEY2Q9Y3R5 2298 aa8.65□□□□□ -1.03
PDLIM5-209ENST00000506632 A0A1W2PQ72 361 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 MASP2O00187 686 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 HAT1O14929 419 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 P2RX6O15547 441 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 FOXS1O43638 330 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 SYF2O95926 243 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 EIF2S1P05198 315 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 FDXRP22570 491 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 HRH2P25021 359 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 PAFAH1B1P43034 410 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 RPL21P46778 160 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 RGS4P49798 205 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 ARL4CP56559 192 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 TBPL1P62380 186 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 SNRPNP63162 240 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 KLC1Q07866 573 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 AIMP2Q13155 320 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 TSTA3Q13630 321 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 HIF1AQ16665 826 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 PHKG1Q16816 387 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 ZXDCQ2QGD7 858 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 HP1BP3Q5SSJ5 553 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 SLC6A19Q695T7 634 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 JMJD6Q6NYC1 403 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 KIRREL2Q6UWL6 708 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 MBOAT1Q6ZNC8 495 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 CSNK1A1LQ8N752 337 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 AMER3Q8N944 861 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 OR11G2Q8NGC1 345 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 STT3BQ8TCJ2 826 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 MCOLN3Q8TDD5 553 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 ANP32BQ92688 251 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 SNF8Q96H20 258 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 CABS1Q96KC9 395 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 CCDC138Q96M89 665 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 SGPP1Q9BX95 441 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 PARVBQ9HBI1 364 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 ATP13A2Q9NQ11 1180 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 CCDC177Q9NQR7 707 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 SEMA3GQ9NS98 782 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 TMEM184CQ9NVA4 438 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 UTP6Q9NYH9 597 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 MOCS1Q9NZB8 636 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 ZNF282Q9UDV7 671 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 FBXL4Q9UKA2 621 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 SH2B3Q9UQQ2 575 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 RUVBL1Q9Y265 456 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 MAP4K5Q9Y4K4 846 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 MAU2Q9Y6X3 613 aa8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 USP9YO00507 2555 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-209ENST00000506632 CNTRLQ7Z7A1 2325 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 KCNE1BA0A087WTH5 132 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 EFCAB8A8MWE9 144 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 H7BY64 318 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 TXNDC9O14530 226 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 KLHL41O60662 606 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 ZGLP1P0C6A0 271 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 SLC26A3P40879 764 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 PGGT1BP53609 377 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 SRSF1Q07955 248 aaKnown RBP eCLIP8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 RAPSNQ13702 412 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 FAM53BQ14153 422 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 FASTKD3Q14CZ7 662 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 HKDC1Q2TB90 917 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 HECTD2Q5U5R9 776 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 PRAMEF13Q5VWM6 474 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 ATG9BQ674R7 924 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 FAM45BPQ6NSW5 357 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 AGTRAPQ6RW13 159 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 IGFL2Q6UWQ7 119 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 SHISA6Q6ZSJ9 500 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 VN1R4Q7Z5H5 301 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 PLD3Q8IV08 490 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 MYO1HQ8N1T3 1032 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 FAM45AQ8TCE6 357 aa8.63□□□□□ -1.03
PDLIM5-209ENST00000506632 PNPLA2Q96AD5 504 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms