RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 TMEM121Q9BTD3 319 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 DPH7Q9BTV6 452 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 TUBB6Q9BUF5 446 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 REPIN1Q9BWE0 567 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 RAB11FIP5Q9BXF6 653 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 ENKD1Q9H0I2 346 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 ZNF700Q9H0M5 742 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 LRRC40Q9H9A6 602 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 NHEJ1Q9H9Q4 299 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 KCNK13Q9HB14 408 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 ARNT2Q9HBZ2 717 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 MKKSQ9NPJ1 570 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 ABCF3Q9NUQ8 709 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 COQ3Q9NZJ6 369 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 SLC2A6Q9UGQ3 507 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 TTC7AQ9ULT0 858 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 R3HDM2Q9Y2K5 976 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 ZNF835Q9Y2P0 537 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 ALG6Q9Y672 507 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 NFS1Q9Y697 457 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 ITPR3Q14573 2671 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 LOC102723996A0A087X1L8 192 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 A0A1W2PPV9 198 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 A0A1W2PQ72 361 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 OR2A25A4D2G3 310 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 NKX2-6A6NCS4 301 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 GABRR3A8MPY1 467 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 PRRG2O14669 202 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 ASNA1O43681 348 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 MAN1A2O60476 641 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 VPS26AO75436 327 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 GPC4O75487 556 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 FKBP9O95302 570 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 C1orf105O95561 183 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 METTL18O95568 372 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 TPOP07202 933 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 ICAM2P13598 275 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 ZNF24P17028 368 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 CD96P40200 585 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 PPP2R2AP63151 447 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 PRAMEP78395 509 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 SEMA3AQ14563 771 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 MAPKAPK3Q16644 382 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 ACER2Q5QJU3 275 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 PTRHD1Q6GMV3 140 aaKnown RBP6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 AADACL2Q6P093 401 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 LRRC8BQ6P9F7 803 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 SUSD1Q6UWL2 747 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 ADCK2Q7Z695 626 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 DOLPP1Q86YN1 238 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 FAM71DQ8N9W8 422 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 TMEM178AQ8NBL3 297 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 OR8K1Q8NGG5 319 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 OR52K1Q8NGK4 314 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 OR2A1Q8NGT9 310 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 OR6P1Q8NGX9 317 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 PHF10Q8WUB8 498 aaKnown RBP6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 ASZ1Q8WWH4 475 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 RERGQ96A58 199 aaPredicted RBP6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 RAD51AP1Q96B01 352 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 MVB12AQ96EY5 273 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 ZNF354BQ96LW1 612 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 ZNF559Q9BR84 538 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 TRIM51Q9BSJ1 452 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 RBCK1Q9BYM8 510 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 DRC3Q9H069 523 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 SYNPO2LQ9H987 977 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 MRPS30Q9NP92 439 aaKnown RBP6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 ABHD10Q9NUJ1 306 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 HCN3Q9P1Z3 774 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 PCYOX1Q9UHG3 505 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 TFR2Q9UP52 801 aa6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 SETD2Q9BYW2 2564 aaPredicted RBP6.52□□□□□ -1.37
NPIPB3-203ENST00000504841 MTORP42345 2549 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 NAV3Q8IVL0 2385 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 A0A1B0GTL3 188 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 SYCE3A1L190 88 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 ASPDHA6ND91 283 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 OR2W5A6NFC9 320 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 MROH6A6NGR9 719 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 E9PLN8 166 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 ADAM10O14672 748 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 P2RX6O15547 441 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 FOXS1O43638 330 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 CDC40O60508 579 aaKnown RBP eCLIP6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 ZWINTO95229 277 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 GAS8O95995 478 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 PTMAP06454 111 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 TPM1P09493 284 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 DNAJA1P31689 397 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 PTGER1P34995 402 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 RPA3P35244 121 aaPredicted RBP6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 SLC26A3P40879 764 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 RFC3P40938 356 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 IST1P53990 364 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 SNRPNP63162 240 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 MYBPHQ13203 477 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 NAA25Q14CX7 972 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 MEP1AQ16819 746 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms