RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PFKLP17858 780 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 HSD17B2P37059 387 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 IFNGR2P38484 337 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 FEN1P39748 380 aaKnown RBP13.66□□□□□ -0.22
TCOF1-207ENST00000504761 PGDP52209 483 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 CLDN2P57739 230 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 CDC42P60953 191 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 HYAL2Q12891 473 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 ARL10Q8N8L6 244 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 LMX1AQ8TE12 382 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 TADA1Q96BN2 335 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 ARMC5Q96C12 935 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 PNPLA3Q9NST1 481 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 ADAMTS6Q9UKP5 1117 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 FEZF1A0PJY2 475 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 TNFRSF11BO00300 401 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 ZDHHC11BP0C7U3 371 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 T-ENOLP0DO92 83 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 IGFBP5P24593 272 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 C1DQ13901 141 aaKnown RBP13.65□□□□□ -0.22
TCOF1-207ENST00000504761 CEACAM7Q14002 265 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 NANOGP8Q6NSW7 305 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 SMYD1Q8NB12 490 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 ISG20Q96AZ6 181 aaKnown RBP13.65□□□□□ -0.22
TCOF1-207ENST00000504761 SLC22A18Q96BI1 424 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 ZFRQ96KR1 1074 aaKnown RBP13.65□□□□□ -0.22
TCOF1-207ENST00000504761 OR2M4Q96R27 311 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 NANOGQ9H9S0 305 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 TPT1P8Q9HAU6 139 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 SMPD3Q9NY59 655 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-207ENST00000504761 RIMKLBQ9ULI2 386 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 SORBS2O94875 1100 aaKnown RBP13.65□□□□□ -0.22
TCOF1-207ENST00000504761 IFNW1P05000 195 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 C5AR1P21730 350 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 ITPKBP27987 946 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 SLC7A1P30825 629 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 CAPZA2P47755 286 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 GALK1P51570 392 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 ID2Q02363 134 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 SLC5A9Q2M3M2 681 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 RFTN2Q52LD8 501 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-207ENST00000504761 CYP4Z2PQ8N1L4 340 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 GTPBP3Q969Y2 492 aaKnown RBP13.65□□□□□ -0.22
TCOF1-207ENST00000504761 MPP4Q96JB8 637 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 AKAP7Q9P0M2 348 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-207ENST00000504761 HS3ST2Q9Y278 367 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 OR52A4PA6NMU1 304 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 ASGR2P07307 311 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 PAX7P23759 505 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 PDHA2P29803 388 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 CCR2P41597 374 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 IL12RB1P42701 662 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 NCF4Q15080 339 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 ZNF761Q86XN6 746 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-207ENST00000504761 CBARPQ8N350 705 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-207ENST00000504761 OR7A2PQ8NGA2 310 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 ZNF282Q9UDV7 671 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-207ENST00000504761 ENOPH1Q9UHY7 261 aa13.65□□□□□ -0.22
TCOF1-207ENST00000504761 GTPBP1O00178 669 aaKnown RBP13.64□□□□□ -0.23
TCOF1-207ENST00000504761 NDUFS1P28331 727 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 RGS8P57771 180 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-207ENST00000504761 EEFSECP57772 596 aaKnown RBP13.64□□□□□ -0.23
TCOF1-207ENST00000504761 LAPTM4AQ15012 233 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 TOMM20Q15388 145 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 OR5AR1Q8NGP9 310 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 HRASLS2Q9NWW9 162 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 ACSL5Q9ULC5 683 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 C6orf47O95873 294 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 LYNP07948 512 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 C1GALT1C1LP0DN25 315 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 THRBP10828 461 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 ARNTP27540 789 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 CTSKP43235 329 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 MTTPP55157 894 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 PRR5P85299 388 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 ZNF155Q12901 538 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-207ENST00000504761 GANABQ14697 944 aaKnown RBP13.64□□□□□ -0.23
TCOF1-207ENST00000504761 CTSL3PQ5NE16 218 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 MACC1Q6ZN28 852 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 RLN3Q8WXF3 142 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 RHBDF1Q96CC6 855 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 F2RL3Q96RI0 385 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 PBX4Q9BYU1 374 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 CPEB1Q9BZB8 566 aaKnown RBP13.64□□□□□ -0.23
TCOF1-207ENST00000504761 ATP6V1HQ9UI12 483 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 PCDHB11Q9Y5F2 797 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 PRSS51A0A1B0GVH4 220 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 B3GALT2O43825 422 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 VEGFDO43915 354 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 UGT2B17O75795 530 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 SEPHS1P49903 392 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 UGT2B15P54855 530 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 FBXO15Q8NCQ5 510 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-207ENST00000504761 KAT2AQ92830 837 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 FOXJ1Q92949 421 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 SLC35G5Q96KT7 338 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 C3orf30Q96M34 536 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 COL21A1Q96P44 957 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 GAL3ST4Q96RP7 486 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 GSDMCQ9BYG8 508 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms