RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 MCATQ8IVS2 390 aaKnown RBP13.59□□□□□ -0.23
RNF4-202ENST00000502316 C4orf33Q8N1A6 199 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 OR1L3Q8NH93 324 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 SLC5A11Q8WWX8 675 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 ESAMQ96AP7 390 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 PGM2Q96G03 612 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 PRAP1Q96NZ9 151 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 ZFYVE21Q9BQ24 234 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 SARGQ9BW04 601 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 CAPS2Q9BXY5 557 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 CCDC86Q9H6F5 360 aaKnown RBP13.59□□□□□ -0.23
RNF4-202ENST00000502316 DNAJC11Q9NVH1 559 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 ARGLU1Q9NWB6 273 aaPredicted RBP13.59□□□□□ -0.23
RNF4-202ENST00000502316 GPRC5BQ9NZH0 403 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 SENP1Q9P0U3 644 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 CPSF2Q9P2I0 782 aaKnown RBP13.59□□□□□ -0.23
RNF4-202ENST00000502316 EMCNQ9ULC0 261 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 DYRK1BQ9Y463 629 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 ACACAQ13085 2346 aa13.59□□□□□ -0.23
RNF4-202ENST00000502316 KCNE1BA0A087WTH5 132 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 TMEM8BA6NDV4 472 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 STX16-NPEPL1H3BU86 382 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 K7EPI3 171 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 COPEO14579 308 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 STX16O14662 325 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 HAT1O14929 419 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 RGS16O15492 202 aaPredicted RBP13.58□□□□□ -0.24
RNF4-202ENST00000502316 SRPX2O60687 465 aaPredicted RBP13.58□□□□□ -0.24
RNF4-202ENST00000502316 SMIM24O75264 130 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 TIAF1O95411 115 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 GNAZP19086 355 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 EPORP19235 508 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 CCR8P51685 355 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 ITGA1P56199 1179 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 PCDH1Q08174 1060 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 E2F2Q14209 437 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 PDK4Q16654 411 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 PWWP2BQ6NUJ5 590 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 C16orf46Q6P387 395 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 SRRM1Q8IYB3 904 aaKnown RBP13.58□□□□□ -0.24
RNF4-202ENST00000502316 BANPQ8N9N5 519 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 SNIP1Q8TAD8 396 aaKnown RBP13.58□□□□□ -0.24
RNF4-202ENST00000502316 APOPT1Q96IL0 206 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 OR2A5Q96R48 311 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 EHD1Q9H4M9 534 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 SYNPO2LQ9H987 977 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 PELI2Q9HAT8 420 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 OPTCQ9UBM4 332 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 SERTAD3Q9UJW9 196 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 GRID1Q9ULK0 1009 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 TMEM184BQ9Y519 407 aaPredicted RBP13.58□□□□□ -0.24
RNF4-202ENST00000502316 PCDHB3Q9Y5E6 796 aa13.58□□□□□ -0.24
RNF4-202ENST00000502316 TNPO3Q9Y5L0 923 aaKnown RBP13.58□□□□□ -0.24
RNF4-202ENST00000502316 SDK2Q58EX2 2172 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 A8MT66 165 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 E7EQ34 232 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 E2F3O00716 465 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 CCNT2O60583 730 aaKnown RBP13.57□□□□□ -0.24
RNF4-202ENST00000502316 PLIN3O60664 434 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 DLGAP3O95886 979 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 PROCP04070 461 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 CTSBP07858 339 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 GCGRP47871 477 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 RPS15AP62244 130 aaKnown RBP13.57□□□□□ -0.24
RNF4-202ENST00000502316 CCDC153Q494R4 210 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 TCTE1Q5JU00 501 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 CATSPEREQ5SY80 951 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 ATG9BQ674R7 924 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 FRMPD2BQ6IN97 320 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 NXPE4Q6UWF7 544 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 SLCO4C1Q6ZQN7 724 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 ADCK2Q7Z695 626 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 DTX1Q86Y01 620 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 GPR135Q8IZ08 494 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 PTGR2Q8N8N7 351 aaPredicted RBP13.57□□□□□ -0.24
RNF4-202ENST00000502316 N4BP2L2Q92802 583 aaPredicted RBP13.57□□□□□ -0.24
RNF4-202ENST00000502316 FGF11Q92914 225 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 WDR34Q96EX3 536 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 SELENOSQ9BQE4 189 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 C1QTNF3Q9BXJ4 246 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 ULBP3Q9BZM4 244 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 COPG2Q9UBF2 871 aa13.57□□□□□ -0.24
RNF4-202ENST00000502316 LOC105369274A0A096LPK9 316 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 LOC102723532A0A0G2JNH3 316 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 A0A0J9YVX5 310 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 TRBC2A0A5B9 178 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 FITM1A5D6W6 292 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 STMND1H3BQB6 276 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 ZSCAN9O15535 394 aaPredicted RBP13.56□□□□□ -0.24
RNF4-202ENST00000502316 TLX3O43711 291 aaPredicted RBP13.56□□□□□ -0.24
RNF4-202ENST00000502316 PRAMEF4O60810 478 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 SCRG1O75711 98 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 OR2B3O76000 313 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 STK17BO94768 372 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 SIX3O95343 332 aaPredicted RBP13.56□□□□□ -0.24
RNF4-202ENST00000502316 SPTBP11277 2137 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 ZNF28P17035 718 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 TAC1P20366 129 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 GRK3P35626 688 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 CASP2P42575 452 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms