RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 ACAT2Q9BWD1 397 aa16.64■□□□□ 0.25
TMEM53-209ENST00000495630 MRPS30Q9NP92 439 aaKnown RBP16.64■□□□□ 0.25
TMEM53-209ENST00000495630 MARCH4Q9P2E8 410 aaPredicted RBP16.64■□□□□ 0.25
TMEM53-209ENST00000495630 AMFRQ9UKV5 643 aa16.64■□□□□ 0.25
TMEM53-209ENST00000495630 HIVEP1P15822 2718 aa16.64■□□□□ 0.25
TMEM53-209ENST00000495630 CCDC168Q8NDH2 2452 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 DCHS2Q6V1P9 2916 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 PCNX1Q96RV3 2341 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 KRT87PA6NCN2 255 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 FOXS1O43638 330 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 NDUFS3O75489 264 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 KRT38O76015 456 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 WISP2O76076 250 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 CYC1P08574 325 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 C8orf89P0DMQ9 161 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 ERGP11308 486 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 PRDX1Q06830 199 aaKnown RBP16.63■□□□□ 0.25
TMEM53-209ENST00000495630 ARHGAP19Q14CB8 494 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 HKDC1Q2TB90 917 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 PCID2Q5JVF3 399 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 H3F3CQ6NXT2 135 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 Q6ZPB1 254 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-209ENST00000495630 PAQR7Q86WK9 346 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 SPPL2CQ8IUH8 684 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 ARHGEF39Q8N4T4 335 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 PPHLN1Q8NEY8 458 aaKnown RBP16.63■□□□□ 0.25
TMEM53-209ENST00000495630 METTL21AQ8WXB1 218 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 RERGQ96A58 199 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-209ENST00000495630 ZNF354BQ96LW1 612 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 DRC3Q9H069 523 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 CHRAC1Q9NRG0 131 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 CELSR1Q9NYQ6 3014 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 TACC2O95359 2948 aa16.63■□□□□ 0.25
TMEM53-209ENST00000495630 A0A0A6YYC8 382 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-209ENST00000495630 GRID2IPA4D2P6 1211 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 A8MUI8 341 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 MIF4GDA9UHW6 222 aaKnown RBP16.62■□□□□ 0.25
TMEM53-209ENST00000495630 I3L1I5 382 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-209ENST00000495630 TTI1O43156 1089 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 IPO7O95373 1038 aaKnown RBP16.62■□□□□ 0.25
TMEM53-209ENST00000495630 CLDN14O95500 239 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 RPA3P35244 121 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-209ENST00000495630 HSD17B2P37059 387 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 TESK1Q15569 626 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 PLAG1Q6DJT9 500 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 ZNF425Q6IV72 752 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 NEK10Q6ZWH5 1172 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 PEX26Q7Z412 305 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 ZC3H7AQ8IWR0 971 aaKnown RBP16.62■□□□□ 0.25
TMEM53-209ENST00000495630 C14orf79Q96F83 325 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 GPR137Q96N19 417 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 CYTH2Q99418 400 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 SPOCK3Q9BQ16 436 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 LACRTQ9GZZ8 138 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 GPAMQ9HCL2 828 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 TINAGQ9UJW2 476 aa16.62■□□□□ 0.25
TMEM53-209ENST00000495630 RUVBL2Q9Y230 463 aaKnown RBP16.62■□□□□ 0.25
TMEM53-209ENST00000495630 IGKV1-8A0A0C4DH67 115 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 TCRBV7S2A1N4TA0A589 114 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 EZRP15311 586 aaKnown RBP16.61■□□□□ 0.25
TMEM53-209ENST00000495630 ATP5DP30049 168 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 KIR3DL1P43629 444 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 PMP22Q01453 160 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 GBX1Q14549 363 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 NDUFA9Q16795 377 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 SYT16Q17RD7 645 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 ACER2Q5QJU3 275 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 SUSD1Q6UWL2 747 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 SPNS3Q6ZMD2 512 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 CPEB2Q7Z5Q1 589 aaKnown RBP16.61■□□□□ 0.25
TMEM53-209ENST00000495630 MAGED4Q96JG8 741 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 FRMD8P1Q9BZ68 369 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-209ENST00000495630 SYNPO2LQ9H987 977 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 RAB6BQ9NRW1 208 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 TREX1Q9NSU2 369 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 MEMO1Q9Y316 297 aa16.61■□□□□ 0.25
TMEM53-209ENST00000495630 SETD2Q9BYW2 2564 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-209ENST00000495630 SOWAHDA6NJG2 315 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 ZNF839A8K0R7 811 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 H0YIG0 161 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 H3BMM5 538 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 C19orf84I3L1E1 186 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 MYO1CO00159 1063 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 CCNDBP1O95273 360 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 APRTP07741 180 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 AVPR1BP47901 424 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 EFNA3P52797 238 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 EIF3BP55884 814 aaKnown RBP16.6■□□□□ 0.25
TMEM53-209ENST00000495630 ABATP80404 500 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 ALDH6A1Q02252 535 aaKnown RBP16.6■□□□□ 0.25
TMEM53-209ENST00000495630 BTBD16Q32M84 506 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 ICE2Q659A1 982 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 SDCCAG8Q86SQ7 713 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-209ENST00000495630 SYCE1Q8N0S2 351 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 AMER2Q8N7J2 671 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 MDS2Q8NDY4 140 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 BIRC8Q96P09 236 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 PANX2Q96RD6 677 aa16.6■□□□□ 0.25
TMEM53-209ENST00000495630 EBNA1BP2Q99848 306 aaKnown RBP16.6■□□□□ 0.25
TMEM53-209ENST00000495630 VN1R1Q9GZP7 353 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms