RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-211	ENST00000493957	IRAK4	Q9NWZ3	460 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	DHCR7	Q9UBM7	475 aa	Known RBP	11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	SERTAD3	Q9UJW9	196 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	PCDHB3	Q9Y5E6	796 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	DOCK10	Q96BY6	2186 aa		11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.16	□□□□□ -0.62
UBA3-211	ENST00000493957	EXOC1L	A0A1B0GW35	172 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	TARM1	B6A8C7	271 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957		H7BY64	318 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957		K7ENP7	123 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	TAPBP	O15533	448 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ZSCAN9	O15535	394 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	P2RX6	O15547	441 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	FKBP9	O95302	570 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	SHBG	P04278	402 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	NPPB	P16860	134 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	TFEB	P19484	476 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ITGAX	P20702	1163 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	CRABP2	P29373	138 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	DLST	P36957	453 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	GDF5	P43026	501 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	MSH2	P43246	934 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	MAGEA12	P43365	314 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	GLRB	P48167	497 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	SERPINB8	P50452	374 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	RPS18	P62269	152 aa	Known RBP	11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	NFKB2	Q00653	900 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	MEF2A	Q02078	507 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	VAC14	Q08AM6	782 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ABHD18	Q0P651	414 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ILF2	Q12905	390 aa	Known RBP	11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	NAA30	Q147X3	362 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	SLC9A5	Q14940	896 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	INO80C	Q6PI98	192 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	FAM198B	Q6UWH4	519 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	FRA10AC1	Q70Z53	315 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ADCK2	Q7Z695	626 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ADAMTSL2	Q86TH1	951 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ISCA2	Q86U28	154 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	GPR135	Q8IZ08	494 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	DSEL	Q8IZU8	1212 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	PLD6	Q8N2A8	252 aa	Known RBP	11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ANKRD7	Q92527	254 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	MR1	Q95460	341 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ESAM	Q96AP7	390 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	RHBDF1	Q96CC6	855 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	TSNARE1	Q96NA8	513 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ZNF285	Q96NJ3	590 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	PRAP1	Q96NZ9	151 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	EGFL8	Q99944	293 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	SELENOS	Q9BQE4	189 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	TRIM54	Q9BYV2	358 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	CHST8	Q9H2A9	424 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	SPNS1	Q9H2V7	528 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ZNF358	Q9NW07	568 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957	ASB1	Q9Y576	335 aa		11.15	□□□□□ -0.62
UBA3-211	ENST00000493957		A0A096LPK6	155 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	FEZF1	A0PJY2	475 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	FOXO6	A8MYZ6	492 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	TRIM49D1	C9J1S8	452 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957		H0YGG7	62 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	UBXN8	O00124	270 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	MEN1	O00255	615 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	CCNDBP1	O95273	360 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	EIF2S1	P05198	315 aa	Known RBP	11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	CAPN1	P07384	714 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	ANXA5	P08758	320 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	LTA4H	P09960	611 aa	Known RBP	11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	TCN2	P20062	427 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	SLC6A12	P48065	614 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	ARF3	P61204	181 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	ATP6V0D1	P61421	351 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	CSNK1G2	P78368	415 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	ABAT	P80404	500 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	PRR20E	P86478	221 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	PRR20C	P86479	221 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	PRR20D	P86480	221 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	PRR20B	P86481	221 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	PRR20A	P86496	221 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	CDKL1	Q00532	357 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	DNASE1L3	Q13609	305 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	TGFBI	Q15582	683 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	ERCC6L	Q2NKX8	1250 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	HKDC1	Q2TB90	917 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	WASHC2D	Q5SRD0	308 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	CATSPERE	Q5SY80	951 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	LCTL	Q6UWM7	567 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	ZNF517	Q6ZMY9	492 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	THOC6	Q86W42	341 aa	Known RBP	11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	GPSM1	Q86YR5	675 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	METTL27	Q8N6F8	245 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	EIF1AD	Q8N9N8	165 aa	Known RBP	11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	NEIL2	Q969S2	332 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	KIAA1191	Q96A73	305 aa		11.14	□□□□□ -0.63
UBA3-211	ENST00000493957	GPR78	Q96P69	363 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms