RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TSSK3Q96PN8 268 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 HHIPQ96QV1 700 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 SH3GL1Q99961 368 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 KCTD14Q9BQ13 255 aaPredicted RBP13.55□□□□□ -0.24
PTPN7-216ENST00000492977 ECSITQ9BQ95 431 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 EFHD1Q9BUP0 239 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 PHF7Q9BWX1 381 aaPredicted RBP13.55□□□□□ -0.24
PTPN7-216ENST00000492977 RMND5AQ9H871 391 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 GMPR2Q9P2T1 348 aaKnown RBP13.55□□□□□ -0.24
PTPN7-216ENST00000492977 MMP17Q9ULZ9 603 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 MAN2B2Q9Y2E5 1009 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 PCM1Q15154 2024 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 PRR19A6NJB7 356 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 ERN1O75460 977 aaKnown RBP13.54□□□□□ -0.24
PTPN7-216ENST00000492977 RPSAP08865 295 aaKnown RBP13.54□□□□□ -0.24
PTPN7-216ENST00000492977 NDUFV2P19404 249 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 PIK3CBP42338 1070 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 HNRNPFP52597 415 aaKnown RBP13.54□□□□□ -0.24
PTPN7-216ENST00000492977 PPP2CBP62714 309 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 PPP2CAP67775 309 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 SRSF11Q05519 484 aaKnown RBP13.54□□□□□ -0.24
PTPN7-216ENST00000492977 CCINQ13939 588 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 FXNQ16595 210 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 GPR153Q6NV75 609 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 KIAA1324Q6UXG2 1013 aaKnown RBP13.54□□□□□ -0.24
PTPN7-216ENST00000492977 FAM124AQ86V42 546 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 PROSER1Q86XN7 944 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 SYT12Q8IV01 421 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 KBTBD2Q8IY47 623 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 RAB42Q8N4Z0 105 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 CATSPER1Q8NEC5 780 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 SMPDL3AQ92484 453 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 ITCHQ96J02 903 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 IL17FQ96PD4 163 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 KCNH6Q9H252 994 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 COPS7BQ9H9Q2 264 aaPredicted RBP13.54□□□□□ -0.24
PTPN7-216ENST00000492977 SIRT5Q9NXA8 310 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 MCM8Q9UJA3 840 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 RIMS3Q9UJD0 308 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 PPT2Q9UMR5 302 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 SH2B3Q9UQQ2 575 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 SNX13Q9Y5W8 968 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 PIPSLA2A3N6 862 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 LRRC72A6NJI9 287 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 ARPC2O15144 300 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 ATP6V1B2P21281 511 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 IDSP22304 550 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 RPL10P27635 214 aaKnown RBP13.54□□□□□ -0.24
PTPN7-216ENST00000492977 GRIA3P42263 894 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 ASMTP46597 345 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 PHEXP78562 749 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 LPCAT4Q643R3 524 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 IZUMO2Q6UXV1 221 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 GPR180Q86V85 440 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 IFNEQ86WN2 208 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 C17orf64Q86WR6 236 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 KRT78Q8N1N4 520 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 C12orf66Q96MD2 445 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 FERD3LQ96RJ6 166 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 GAS2L1Q99501 681 aaPredicted RBP13.54□□□□□ -0.24
PTPN7-216ENST00000492977 MENTQ9BUN1 341 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 TRIM8Q9BZR9 551 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 OSGEPL1Q9H4B0 414 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 PELI2Q9HAT8 420 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 FZD3Q9NPG1 666 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 ARMC1Q9NVT9 282 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 VAPAQ9P0L0 249 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 EGFL7Q9UHF1 273 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 ADGRE2Q9UHX3 823 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 PLAGL1Q9UM63 463 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 SUFUQ9UMX1 484 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 LRCH1Q9Y2L9 728 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 PCDHB3Q9Y5E6 796 aa13.54□□□□□ -0.24
PTPN7-216ENST00000492977 CFAP20Q9Y6A4 193 aaKnown RBP13.54□□□□□ -0.24
PTPN7-216ENST00000492977 A0A096LPI6 279 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 SHISA7A6NL88 538 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 FPGTO14772 594 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 DFNA5O60443 496 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 ETHE1O95571 254 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 CAPNS1P04632 268 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 CXCR2P25025 360 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 PEX2P28328 305 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 TPMTP51580 245 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 RPS13P62277 151 aaKnown RBP13.53□□□□□ -0.24
PTPN7-216ENST00000492977 PHC1P78364 1004 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 MTAPQ13126 283 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 PGS1Q32NB8 556 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 RUNDC3AQ59EK9 446 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 LRIF1Q5T3J3 769 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 GALNT18Q6P9A2 607 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 FAM129CQ86XR2 697 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 PDSS2Q86YH6 399 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 SPPL2CQ8IUH8 684 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 LILRA2Q8N149 483 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 C1orf52Q8N6N3 182 aaKnown RBP13.53□□□□□ -0.24
PTPN7-216ENST00000492977 LMNTD1Q8N9Z9 388 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 ADCY4Q8NFM4 1077 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 SLCO4A1Q96BD0 722 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 EGLN2Q96KS0 407 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 INSM2Q96T92 566 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms