RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CASP14P31944 242 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 VIPR1P32241 457 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 EPHX2P34913 555 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 NUDT1P36639 197 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 GRIA1P42261 906 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 MMP13P45452 471 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 SLC6A12P48065 614 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 GMPSP49915 693 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 RGS8P57771 180 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 CSNK2A1P68400 391 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 MTAPQ13126 283 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 DUSP8Q13202 625 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 STX3Q13277 289 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 CTBP1Q13363 440 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 TGFBIQ15582 683 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 LTB4RQ15722 352 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 C5orf64Q2M2E5 130 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 USP41Q3LFD5 358 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 RABGAP1LQ5R372 815 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 PRAMEF19Q5SWL8 479 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 KHDRBS2Q5VWX1 349 aaKnown RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 DGAT2L7PQ6IED9 249 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 FBXO42Q6P3S6 717 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 PODNL1Q6PEZ8 512 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ZC3H14Q6PJT7 736 aaKnown RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 C5orf46Q6UWT4 87 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 FAM151BQ6UXP7 276 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 C1orf229Q6ZS94 237 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ZBTB49Q6ZSB9 765 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 PAQR9Q6ZVX9 377 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ACAD11Q709F0 780 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 SLC46A3Q7Z3Q1 461 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ABI3BPQ7Z7G0 1075 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 LHFPL3Q86UP9 236 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 NUDCD3Q8IVD9 361 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 PDIK1LQ8N165 341 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 C17orf78Q8N4C9 275 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 RNF148Q8N7C7 305 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ANKRD44Q8N8A2 993 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 BEND2Q8NDZ0 799 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 TMEM104Q8NE00 496 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 DDHD1Q8NEL9 900 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 CSNK2A3Q8NEV1 391 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 BEST2Q8NFU1 509 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 PIWIL2Q8TC59 973 aaKnown RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 PTPMT1Q8WUK0 201 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 HMGB4Q8WW32 186 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 DLG3Q92796 817 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 MARC2Q969Z3 335 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ACDQ96AP0 544 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 MCRS1Q96EZ8 462 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 C16orf92Q96LL3 132 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 C7orf50Q9BRJ6 194 aaKnown RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 INPP5KQ9BT40 448 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 MCMBPQ9BTE3 642 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 KATNB1Q9BVA0 655 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 DGCR6LQ9BY27 220 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ZC3H12CQ9C0D7 883 aaKnown RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 IL22Q9GZX6 179 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 MKRN2Q9H000 416 aaKnown RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 NUAK2Q9H093 628 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 POLR3FQ9H1D9 316 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 USP29Q9HBJ7 922 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 KCNMB3Q9NPA1 279 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 FSCN3Q9NQT6 498 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 TXLNGQ9NUQ3 528 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 IMP3Q9NV31 184 aaKnown RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ZNF701Q9NV72 531 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 GID8Q9NWU2 228 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ERVK13-1Q9NX77 482 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 MYEF2Q9P2K5 600 aaKnown RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 UVRAGQ9P2Y5 699 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 UBQLN2Q9UHD9 624 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 CDH22Q9UJ99 828 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ERRFI1Q9UJM3 462 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-220ENST00000492859 ERVW-1Q9UQF0 538 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 KLK4Q9Y5K2 254 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 EEA1Q15075 1411 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 TNRQ92752 1358 aa4.08□□□□□ -1.76
BRCA1-220ENST00000492859 TEX13CA0A0J9YWL9 993 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 TEX51A0A1B0GUA7 166 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 A0A1B0GW15 77 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 A0A1W2PQ72 361 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 A0A1W2PRX2 142 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 FABP12A6NFH5 140 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 MGAT4DA6NG13 374 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 TUBAL3A6NHL2 446 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 FBLL1A6NHQ2 334 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 SH2D7A6NKC9 451 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 SDR42E2A6NKP2 422 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 F8W036 122 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 KLRC4-KLRK1H3BQV0 150 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 SMLR1H3BR10 107 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 NRP1O14786 923 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ARPC3O15145 178 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 NUPL2O15504 423 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 LIASO43766 372 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 FCMRO60667 390 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 PEX10O60683 326 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms