RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 Q8NA96 180 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 OR5K2Q8NHB8 316 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 SLC44A1Q8WWI5 657 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 N4BP2L2Q92802 583 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 SLC22A18Q96BI1 424 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 GPR22Q99680 433 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 DPH2Q9BQC3 489 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 RAB11FIP5Q9BXF6 653 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 TXLNGYQ9BZA5 131 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 ROPN1BQ9BZX4 212 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 SPRTNQ9H040 489 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 ROPN1Q9HAT0 212 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 CIDEBQ9UHD4 219 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 ZNF180Q9UJW8 692 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 SERTAD3Q9UJW9 196 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 PADI2Q9Y2J8 665 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 ACOT9Q9Y305 439 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 PCDHGA9Q9Y5G4 932 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 PSAT1Q9Y617 370 aa10.59□□□□□ -0.71
TMEM39A-211ENST00000491685 CREBBPQ92793 2442 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 SEC16AO15027 2179 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 ANKRD12Q6UB98 2062 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 A0A087X1B8 175 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 A6NL46 340 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 E7EQ34 232 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 KLF7O75840 302 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 PIAS1O75925 651 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 MATN4O95460 622 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 IGHEP01854 428 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 CHRM5P08912 532 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 VARSP26640 1264 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 SLC26A3P40879 764 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 TAS2R39P59534 338 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 ATP6V0D1P61421 351 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 SLC9A5Q14940 896 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 RASA2Q15283 850 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 ACSBG2Q5FVE4 666 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 BEND6Q5SZJ8 279 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 RBM20Q5T481 1227 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 KLC3Q6P597 504 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 ADGRD1Q6QNK2 874 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 DCUN1D3Q8IWE4 304 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 CPNE9Q8IYJ1 553 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 CPT1CQ8TCG5 803 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 CD200R1Q8TD46 325 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 DENND1AQ8TEH3 1009 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 EEF1AKMT1Q8WVE0 214 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 CABS1Q96KC9 395 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 PAFAH2Q99487 392 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 MENTQ9BUN1 341 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 NMRAL1Q9HBL8 299 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 GALPQ9UBC7 116 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 DHCR7Q9UBM7 475 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 CDYLQ9Y232 598 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 KLHL20Q9Y2M5 609 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 PCDHGB7Q9Y5F8 929 aa10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 ANKRD17O75179 2603 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-211ENST00000491685 CCDC189A1A4V9 331 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 KRT87PA6NCN2 255 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 TTLL8A6PVC2 850 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 C9J4A7 227 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 FAM155BO75949 473 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 OR2B3O76000 313 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 C1orf105O95561 183 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 SYF2O95926 243 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 MYBL2P10244 700 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 AGXTP21549 392 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 OTX2P32243 289 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 HSD17B3P37058 310 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 RRADP55042 308 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 CDKN2DP55273 166 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 GBX1Q14549 363 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 ARHGAP19Q14CB8 494 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 CYHR1Q6ZMK1 362 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 UBE2R2Q712K3 238 aaPredicted RBP10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 HDXQ7Z353 690 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 MRGPREQ86SM8 312 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 GSPT2Q8IYD1 628 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 GPR135Q8IZ08 494 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 RBMXL3Q8N7X1 1067 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 LINC01555Q8NAE3 123 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 OR9A1PQ8NGU1 263 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 STAG3L4Q8TBR4 150 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 ATL1Q8WXF7 558 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 ASB11Q8WXH4 323 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 LINGO1Q96FE5 620 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 CCDC138Q96M89 665 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 IP6K3Q96PC2 410 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 GBP5Q96PP8 586 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 DHRS4Q9BTZ2 278 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 PARVBQ9HBI1 364 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 OR6C2Q9NZP2 312 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 SLC17A6Q9P2U8 582 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 CTNNAL1Q9UBT7 734 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 PLEKHB1Q9UF11 243 aaPredicted RBP10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 MAP4K5Q9Y4K4 846 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 DOCK10Q96BY6 2186 aa10.57□□□□□ -0.72
TMEM39A-211ENST00000491685 LRBAP50851 2863 aa10.56□□□□□ -0.72
TMEM39A-211ENST00000491685 A0A0J9YY10 115 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms