RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 SRPK3Q9UPE1 567 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 PTRH2Q9Y3E5 179 aaKnown RBP12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 FAM95CA0A1B0GW59 222 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 FITM1A5D6W6 292 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 SMIM23A6NLE4 172 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 TARM1B6A8C7 271 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 FAM155BO75949 473 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 KRT38O76015 456 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 OTX2P32243 289 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 PGDP52209 483 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 MLLT10P55197 1068 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 PDAP1Q13442 181 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 TTLL9Q3SXZ7 439 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 NADK2Q4G0N4 442 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 HECTD2Q5U5R9 776 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 FAM45BPQ6NSW5 357 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 FBXO42Q6P3S6 717 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 TTC23LQ6PF05 361 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 TTLL10Q6ZVT0 673 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 ZC3HC1Q86WB0 502 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 OR9A1PQ8NGU1 263 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 FAM45AQ8TCE6 357 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 CD200R1Q8TD46 325 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 ASB11Q8WXH4 323 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 ZUFSPQ96AP4 578 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 MIB2Q96AX9 1013 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 PAFAH2Q99487 392 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 PKP4Q99569 1192 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 RBBP8Q99708 897 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 MESP1Q9BRJ9 268 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 AARSD1Q9BTE6 412 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 NDC1Q9BTX1 674 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 FUT8Q9BYC5 575 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 SPATA7Q9P0W8 599 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 STOX2Q9P2F5 926 aaPredicted RBP12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 IFT80Q9P2H3 777 aaPredicted RBP12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 TRMT6Q9UJA5 497 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 PADI2Q9Y2J8 665 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 VWA7Q9Y334 891 aa12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 SPTAN1Q13813 2472 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-206ENST00000491668 DOPEY2Q9Y3R5 2298 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 UQCRHLA0A096LP55 91 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 A0A1B0GX78 115 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 OR2A25A4D2G3 310 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 A6NL46 340 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 CYSRT1A8MQ03 144 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 GFYI3L273 518 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 FKBP9O95302 570 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 UQCRHP07919 91 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 ALAS2P22557 587 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 SKIV2L2P42285 1042 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 SERPINB9P50453 376 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 VSX2P58304 361 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 SRSF1Q07955 248 aaKnown RBP eCLIP12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 USP10Q14694 798 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 SSPNQ14714 243 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 WASHC2DQ5SRD0 308 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 RBM20Q5T481 1227 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 SUSD1Q6UWL2 747 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 MED25Q71SY5 747 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 RNF44Q7L0R7 432 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 LRRC56Q8IYG6 542 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 MREGQ8N565 214 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 TMEM102Q8N9M5 508 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 TEX19Q8NA77 164 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 ZNF480Q8WV37 535 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 SLC44A1Q8WWI5 657 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 DLG3Q92796 817 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 KCNJ9Q92806 393 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 TSPAN17Q96FV3 270 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 FOPNLQ96NB1 174 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 GPR21Q99679 349 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 SELENOSQ9BQE4 189 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 ACAT2Q9BWD1 397 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 PPCSQ9HAB8 311 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 CUTCQ9NTM9 273 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 TXLNGQ9NUQ3 528 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 INTS7Q9NVH2 962 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 IRAK4Q9NWZ3 460 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 KLHL42Q9P2K6 505 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 CTSFQ9UBX1 484 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 HEATR5BQ9P2D3 2071 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 PCM1Q15154 2024 aa12.13□□□□□ -0.47
SEC61A1-206ENST00000491668 A0A0J9YVX5 310 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 TLDC2A0PJX2 215 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 CLEC18AA5D8T8 446 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 DSCR3O14972 297 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 SORBS2O94875 1100 aaKnown RBP12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 SLC16A8O95907 504 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 C1QAP02745 245 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 SHBGP04278 402 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 STMN1P16949 149 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 FOLR3P41439 243 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 OR1D4P47884 311 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 CD97P48960 835 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 SNRPNP63162 240 aaKnown RBP12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 POU4F1Q01851 419 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 RAPSNQ13702 412 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 GRM7Q14831 915 aa12.12□□□□□ -0.47
SEC61A1-206ENST00000491668 NKG7Q16617 165 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms