RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 ULK1O75385 1050 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 SKAP2O75563 359 aaPredicted RBP13.02□□□□□ -0.33
NUP188-208ENST00000491502 OR4F21O95013 312 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 NCF2P19878 526 aaPredicted RBP13.02□□□□□ -0.33
NUP188-208ENST00000491502 RPL10P27635 214 aaKnown RBP13.02□□□□□ -0.33
NUP188-208ENST00000491502 IMPA1P29218 277 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 GDF5P43026 501 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 IRF8Q02556 426 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 BTKQ06187 659 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 PCDH1Q08174 1060 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 BIRC2Q13490 618 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 KRT72Q14CN4 511 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 HIST2H2ACQ16777 129 aaPredicted RBP13.02□□□□□ -0.33
NUP188-208ENST00000491502 C18orf21Q32NC0 220 aaPredicted RBP13.02□□□□□ -0.33
NUP188-208ENST00000491502 FBXO48Q5FWF7 155 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 PAGE2BQ5JRK9 111 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 THEMIS2Q5TEJ8 643 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 CLEC6AQ6EIG7 209 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 HIST2H2AA3Q6FI13 130 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 MBOAT1Q6ZNC8 495 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 CLNKQ7Z7G1 428 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 MYLK4Q86YV6 388 aaPredicted RBP13.02□□□□□ -0.33
NUP188-208ENST00000491502 PARP9Q8IXQ6 854 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 FITM2Q8N6M3 262 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 CDYL2Q8N8U2 506 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 L3MBTL4Q8NA19 623 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 OR4F6Q8NGB9 312 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 OR5AR1Q8NGP9 310 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 ZNF480Q8WV37 535 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 UBE2E3Q969T4 207 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 CXorf40BQ96DE9 158 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 MAELQ96JY0 434 aaKnown RBP13.02□□□□□ -0.33
NUP188-208ENST00000491502 GFM1Q96RP9 751 aaKnown RBP13.02□□□□□ -0.33
NUP188-208ENST00000491502 INSM2Q96T92 566 aaPredicted RBP13.02□□□□□ -0.33
NUP188-208ENST00000491502 EBF4Q9BQW3 602 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 LRRN3Q9H3W5 708 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 ACTR5Q9H9F9 607 aaPredicted RBP13.02□□□□□ -0.33
NUP188-208ENST00000491502 IMP3Q9NV31 184 aaKnown RBP13.02□□□□□ -0.33
NUP188-208ENST00000491502 SLC22A14Q9Y267 594 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 PCYT1BQ9Y5K3 369 aaPredicted RBP13.02□□□□□ -0.33
NUP188-208ENST00000491502 DNAJC15Q9Y5T4 150 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 USP24Q9UPU5 2620 aa13.02□□□□□ -0.33
NUP188-208ENST00000491502 SPEGQ15772 3267 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 PIKFYVEQ9Y2I7 2098 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 SDHDO14521 159 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 RGS14O43566 566 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 CAPN1P07384 714 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 MTHFD1P11586 935 aaKnown RBP13.01□□□□□ -0.33
NUP188-208ENST00000491502 F3P13726 295 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 CXCR2P25025 360 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 GPR3P46089 330 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 LSSP48449 732 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 RAB28P51157 221 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 ERVPABLB-1P60509 514 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 STX1BP61266 288 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 PHEXP78562 749 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 CCL7P80098 99 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 TRAF3Q13114 568 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 MAD2L1Q13257 205 aaPredicted RBP13.01□□□□□ -0.33
NUP188-208ENST00000491502 RPE65Q16518 533 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 CYP2A13Q16696 494 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 CLPPQ16740 277 aaPredicted RBP13.01□□□□□ -0.33
NUP188-208ENST00000491502 SMU1Q2TAY7 513 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 LSM12Q3MHD2 195 aaKnown RBP13.01□□□□□ -0.33
NUP188-208ENST00000491502 UGT3A2Q3SY77 523 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 SLC9B1Q4ZJI4 515 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 LACTB2Q53H82 288 aaPredicted RBP13.01□□□□□ -0.33
NUP188-208ENST00000491502 LCTLQ6UWM7 567 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 ATG14Q6ZNE5 492 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 MAVSQ7Z434 540 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 SPATA19Q7Z5L4 167 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 TRIM48Q8IWZ4 208 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 RBM12BQ8IXT5 1001 aaKnown RBP13.01□□□□□ -0.33
NUP188-208ENST00000491502 ARL14Q8N4G2 192 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
NUP188-208ENST00000491502 OR52B6Q8NGF0 335 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 CMTM5Q96DZ9 223 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 TMEM74Q96NL1 305 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 EFCAB11Q9BUY7 163 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 SGPP1Q9BX95 441 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 MYLK2Q9H1R3 596 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 EHD1Q9H4M9 534 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 ELOVL6Q9H5J4 265 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 KIR3DX1Q9H7L2 352 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 SYNDIG1Q9H7V2 258 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 POLR1BQ9H9Y6 1135 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 ABCF3Q9NUQ8 709 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 PLEKHM1Q9Y4G2 1056 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 ST14Q9Y5Y6 855 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 RNF215Q9Y6U7 377 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 ACACAQ13085 2346 aa13.01□□□□□ -0.33
NUP188-208ENST00000491502 KMT2BQ9UMN6 2715 aaPredicted RBP13□□□□□ -0.33
NUP188-208ENST00000491502 KIR2DS5A0A0G2JLQ3 304 aa13□□□□□ -0.33
NUP188-208ENST00000491502 A0A0G2JNG1 304 aa13□□□□□ -0.33
NUP188-208ENST00000491502 TMEM233B4DJY2 109 aa13□□□□□ -0.33
NUP188-208ENST00000491502 E7ENX8 843 aa13□□□□□ -0.33
NUP188-208ENST00000491502 KIR2DS3K7RE56 304 aa13□□□□□ -0.33
NUP188-208ENST00000491502 PPP6CO00743 305 aa13□□□□□ -0.33
NUP188-208ENST00000491502 PIP5K1BO14986 540 aa13□□□□□ -0.33
NUP188-208ENST00000491502 UBDO15205 165 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms