RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 MAP2K7O14733 419 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 ZSCAN9O15535 394 aaPredicted RBP18.74■□□□□ 0.59
SEC22A-209ENST00000491366 KLK10O43240 276 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 ZNF749O43361 778 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 CPNE3O75131 537 aaKnown RBP18.74■□□□□ 0.59
SEC22A-209ENST00000491366 DLGAP3O95886 979 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 MTHFD2P13995 350 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 GGT5P36269 586 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 CCR8P51685 355 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 CSNK1G2P78368 415 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 MEF2AQ02078 507 aaPredicted RBP18.74■□□□□ 0.59
SEC22A-209ENST00000491366 CLN3Q13286 438 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 RASA2Q15283 850 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 ST3GAL2Q16842 350 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 CATSPEREQ5SY80 951 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 C6orf15Q6UXA7 325 aaPredicted RBP18.74■□□□□ 0.59
SEC22A-209ENST00000491366 TMPRSS11BQ86T26 416 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 CACNA2D3Q8IZS8 1091 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 NLGN4XQ8N0W4 816 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 NLGN4YQ8NFZ3 816 aaPredicted RBP18.74■□□□□ 0.59
SEC22A-209ENST00000491366 ZBTB9Q96C00 473 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 MRPL57Q9BQC6 102 aaKnown RBP18.74■□□□□ 0.59
SEC22A-209ENST00000491366 SPRY4Q9C004 299 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 DNAJC11Q9NVH1 559 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 ASB1Q9Y576 335 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 KCNE2Q9Y6J6 123 aa18.74■□□□□ 0.59
SEC22A-209ENST00000491366 FREM2Q5SZK8 3169 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 FEZF1A0PJY2 475 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.73■□□□□ 0.59
SEC22A-209ENST00000491366 H0YGG7 62 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 STATHP02808 62 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 ATXN8OSP0DMR3 200 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 ATP1A2P50993 1020 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 ARF3P61204 181 aaPredicted RBP18.73■□□□□ 0.59
SEC22A-209ENST00000491366 CDC16Q13042 620 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 WASHC2DQ5SRD0 308 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 C16orf46Q6P387 395 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 LRRC69Q6ZNQ3 347 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 VASH2Q86V25 355 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 DTX1Q86Y01 620 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 KLHDC8AQ8IYD2 350 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 RIBC1Q8N443 379 aaPredicted RBP18.73■□□□□ 0.59
SEC22A-209ENST00000491366 SLC38A9Q8NBW4 561 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 NKD1Q969G9 470 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 CD244Q9BZW8 370 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 ROPN1BQ9BZX4 212 aaPredicted RBP18.73■□□□□ 0.59
SEC22A-209ENST00000491366 MRPL46Q9H2W6 279 aaKnown RBP18.73■□□□□ 0.59
SEC22A-209ENST00000491366 SYNPO2LQ9H987 977 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 ROPN1Q9HAT0 212 aaPredicted RBP18.73■□□□□ 0.59
SEC22A-209ENST00000491366 TMEM216Q9P0N5 145 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 PCDHB3Q9Y5E6 796 aa18.73■□□□□ 0.59
SEC22A-209ENST00000491366 SDK2Q58EX2 2172 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 CCDC151A5D8V7 595 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 H3BMH7 237 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 SRPX2O60687 465 aaPredicted RBP18.72■□□□□ 0.59
SEC22A-209ENST00000491366 SMIM24O75264 130 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 GRK3P35626 688 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 ALDH18A1P54886 795 aaKnown RBP18.72■□□□□ 0.59
SEC22A-209ENST00000491366 PDK4Q16654 411 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 KRT71Q3SY84 523 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 TCTE1Q5JU00 501 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 TLDC1Q6P9B6 456 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 NXPE4Q6UWF7 544 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 LRRC70Q7Z2Q7 622 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 SPACA3Q8IXA5 215 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 C4orf33Q8N1A6 199 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 ESX1Q8N693 406 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 IL22RA1Q8N6P7 574 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 PTGR2Q8N8N7 351 aaPredicted RBP18.72■□□□□ 0.59
SEC22A-209ENST00000491366 TTC29Q8NA56 475 aaPredicted RBP18.72■□□□□ 0.59
SEC22A-209ENST00000491366 ABHD11Q8NFV4 315 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 UBTD2Q8WUN7 234 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 RERGQ96A58 199 aaPredicted RBP18.72■□□□□ 0.59
SEC22A-209ENST00000491366 NDC1Q9BTX1 674 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 PELI2Q9HAT8 420 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 OPTCQ9UBM4 332 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 AP1M2Q9Y6Q5 423 aa18.72■□□□□ 0.59
SEC22A-209ENST00000491366 PCM1Q15154 2024 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 LRRC14BA6NHZ5 514 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 CCNYL3P0C7X3 344 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 GNAZP19086 355 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 VARSP26640 1264 aaKnown RBP18.71■□□□□ 0.59
SEC22A-209ENST00000491366 BCL6P41182 706 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 RPS15AP62244 130 aaKnown RBP18.71■□□□□ 0.59
SEC22A-209ENST00000491366 ZNF844Q08AG5 666 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 GPS2Q13227 327 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 SETDB1Q15047 1291 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 C1orf189Q5VU69 101 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 LCA5Q86VQ0 697 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 CSNK1A1LQ8N752 337 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 PHF21BQ96EK2 531 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 ZNF285Q96NJ3 590 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 OR2A5Q96R48 311 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 DPH1Q9BZG8 443 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 SPNS1Q9H2V7 528 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 DHCR7Q9UBM7 475 aaKnown RBP18.71■□□□□ 0.59
SEC22A-209ENST00000491366 DCDC2Q9UHG0 476 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 LGALS13Q9UHV8 139 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 ANGPTL3Q9Y5C1 460 aa18.71■□□□□ 0.59
SEC22A-209ENST00000491366 ACACBO00763 2458 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms