RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 LTBP1Q14766 1721 aa3.12□□□□□ -1.91
PHC3-213ENST00000491258 SALL1Q9NSC2 1324 aa3.12□□□□□ -1.91
PHC3-213ENST00000491258 N4BP2Q86UW6 1770 aaPredicted RBP3.12□□□□□ -1.91
PHC3-213ENST00000491258 SSC5DA1L4H1 1573 aa3.12□□□□□ -1.91
PHC3-213ENST00000491258 KAT6BQ8WYB5 2073 aa3.12□□□□□ -1.91
PHC3-213ENST00000491258 COL4A4P53420 1690 aaPredicted RBP3.11□□□□□ -1.91
PHC3-213ENST00000491258 TNRC6CQ9HCJ0 1690 aaKnown RBP3.11□□□□□ -1.91
PHC3-213ENST00000491258 TRANK1O15050 2925 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 ADAMTSL1Q8N6G6 1762 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 SCN11AQ9UI33 1791 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 GPR75-ASB3A0A0A6YYF3 556 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 PRSS51A0A1B0GVH4 220 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 RRN3P2A6NIE6 340 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 MPTX1A8MV57 137 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 PDHXO00330 501 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 CXCL11O14625 94 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 IPO8O15397 1037 aaKnown RBP3.11□□□□□ -1.91
PHC3-213ENST00000491258 ENTPD3O75355 529 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 WDHD1O75717 1129 aaPredicted RBP3.11□□□□□ -1.91
PHC3-213ENST00000491258 DFFBO76075 338 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 PYGLP06737 847 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 MELTFP08582 738 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 GP9P14770 177 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 MTHFRP42898 656 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 B3GALT5-AS1P59052 145 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 HERV-K104P61576 105 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 CX3CL1P78423 397 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 MECOMQ03112 1051 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 DMPKQ09013 629 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 TCP10Q12799 353 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 TMEM198Q66K66 360 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 ACSM2BQ68CK6 577 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 ATP8B4Q8TF62 1192 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 RFT1Q96AA3 541 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 MTERF3Q96E29 417 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 ZNF486Q96H40 463 aaPredicted RBP3.11□□□□□ -1.91
PHC3-213ENST00000491258 SLC45A3Q96JT2 553 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 LINC00167Q96N53 147 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 SLC22A12Q96S37 553 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 GNB4Q9HAV0 340 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 HHATLQ9HCP6 504 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 HMG20BQ9P0W2 317 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 LUZP4Q9P127 313 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 OSGIN1Q9UJX0 560 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 TNNQ9UQP3 1299 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 GAKO14976 1311 aa3.11□□□□□ -1.91
PHC3-213ENST00000491258 COL1A1P02452 1464 aaPredicted RBP3.1□□□□□ -1.91
PHC3-213ENST00000491258 A0A1B0GUL7 405 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 LDHCP07864 332 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 FOLR2P14207 255 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 PIK3R1P27986 724 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 HOXD10P28358 340 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 BTDP43251 543 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 CCT5P48643 541 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 PRMT2P55345 433 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 G3BP1Q13283 466 aaKnown RBP eCLIP3.1□□□□□ -1.91
PHC3-213ENST00000491258 FAM166AQ6J272 317 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 BTN2A1Q7KYR7 527 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 SCYL3Q8IZE3 742 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 HJURPQ8NCD3 748 aaPredicted RBP3.1□□□□□ -1.91
PHC3-213ENST00000491258 NUP37Q8NFH4 326 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 OR6S1Q8NH40 331 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 TOMM40LQ969M1 308 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 NSUN4Q96CB9 384 aaKnown RBP3.1□□□□□ -1.91
PHC3-213ENST00000491258 FAM81BQ96LP2 452 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 AGAP4Q96P64 663 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 GAD1Q99259 594 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 C1QTNF1Q9BXJ1 281 aa3.1□□□□□ -1.91
PHC3-213ENST00000491258 PAIP1Q9H074 479 aaKnown RBP3.1□□□□□ -1.91
PHC3-213ENST00000491258 SPTBN5Q9NRC6 3674 aaKnown RBP3.1□□□□□ -1.91
PHC3-213ENST00000491258 CHD8Q9HCK8 2581 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 VCANP13611 3396 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 FAM237BA0A1B0GVD1 139 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 UQCRFS1P1P0C7P4 283 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 ZBTB25P24278 435 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 IL4RP24394 825 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 TUBP50607 506 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 HLCSP50747 726 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 SNRPEP62304 92 aaKnown RBP3.09□□□□□ -1.91
PHC3-213ENST00000491258 GSTO1P78417 241 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 NIPAL4Q0D2K0 466 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 SPP2Q13103 211 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 SQLEQ14534 574 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 ZSCAN23Q3MJ62 389 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 GORABQ5T7V8 394 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 LYSMD4Q5XG99 296 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 GLDNQ6ZMI3 551 aaPredicted RBP3.09□□□□□ -1.91
PHC3-213ENST00000491258 DZIP1Q86YF9 867 aaKnown RBP3.09□□□□□ -1.91
PHC3-213ENST00000491258 ABHD12Q8N2K0 398 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 TMTC2Q8N394 836 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 FRMD1Q8N878 549 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 GPRC5AQ8NFJ5 357 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 LRRC15Q8TF66 581 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 FRAT1Q92837 279 aaPredicted RBP3.09□□□□□ -1.91
PHC3-213ENST00000491258 PDLIM5Q96HC4 596 aaKnown RBP3.09□□□□□ -1.91
PHC3-213ENST00000491258 PARK7Q99497 189 aaKnown RBP3.09□□□□□ -1.91
PHC3-213ENST00000491258 VN1R1Q9GZP7 353 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 RAI14Q9P0K7 980 aa3.09□□□□□ -1.91
PHC3-213ENST00000491258 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.09□□□□□ -1.91
PHC3-213ENST00000491258 MROH7-TTC4A0A0A0MT08 1334 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms