RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 GOT2P00505 430 aaKnown RBP12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 EEF1DP29692 281 aaKnown RBP12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 CD96P40200 585 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 ST13P50502 369 aaKnown RBP12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 COPS2P61201 443 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 HSF1Q00613 529 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 SEMA3AQ14563 771 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 NAA25Q14CX7 972 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 OR1C1Q15619 314 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 PARP6Q2NL67 630 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 BTBD16Q32M84 506 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 GARNL3Q5VVW2 1013 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 PLAG1Q6DJT9 500 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 LRRC8BQ6P9F7 803 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 AFTPHQ6ULP2 937 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 LANCL3Q6ZV70 420 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 ZNF534Q76KX8 674 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 KRT222Q8N1A0 295 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 GHDCQ8N2G8 530 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 ARHGEF39Q8N4T4 335 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 RAB42Q8N4Z0 105 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 CSNK1A1LQ8N752 337 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 HDAC10Q969S8 669 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 NPAS2Q99743 824 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 UTP23Q9BRU9 249 aaKnown RBP12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 OSBPL8Q9BZF1 889 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 ABHD10Q9NUJ1 306 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 ANKRD10Q9NXR5 420 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 SLC2A6Q9UGQ3 507 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 TTC7AQ9ULT0 858 aaPredicted RBP12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 PPT2Q9UMR5 302 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 EFR3BQ9Y2G0 817 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 ASB1Q9Y576 335 aa12.9□□□□□ -0.34
CTDSP1-210ENST00000491064 A0A0A6YYC8 382 aaPredicted RBP12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 FAM221AA4D161 298 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 I3L1I5 382 aaPredicted RBP12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 PHF2O75151 1096 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 VPS26AO75436 327 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 TSPAN12O95859 305 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 CD46P15529 392 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 CMPK1P30085 196 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 PTPN7P35236 360 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 MAT1AQ00266 395 aaKnown RBP12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 TRIM14Q14142 442 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 FASTKQ14296 549 aaKnown RBP12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 TMED2Q15363 201 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 MEP1AQ16819 746 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 SPINK14Q6IE38 97 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 GALNTL5Q7Z4T8 443 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 CPEB2Q7Z5Q1 589 aaKnown RBP12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 FGD2Q7Z6J4 655 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 CRLF3Q8IUI8 442 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 EID3Q8N140 333 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 DNAAF3Q8N9W5 541 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 TMEM178AQ8NBL3 297 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 OR4L1Q8NH43 312 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 METTL21AQ8WXB1 218 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 PLCD4Q9BRC7 762 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 ACAT2Q9BWD1 397 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 VN1R1Q9GZP7 353 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 DRC3Q9H069 523 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 COQ3Q9NZJ6 369 aa12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 RUVBL2Q9Y230 463 aaKnown RBP12.89□□□□□ -0.35
CTDSP1-210ENST00000491064 IGKV1-8A0A0C4DH67 115 aa12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 PRRG2O14669 202 aa12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 MAN1A2O60476 641 aa12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 DNAJA1P31689 397 aaKnown RBP12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 C11orf63Q6NUN7 778 aa12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 PAQR7Q86WK9 346 aa12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 OR52K1Q8NGK4 314 aa12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 SKA2Q8WVK7 121 aaPredicted RBP12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 OR2A5Q96R48 311 aa12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 CYTH2Q99418 400 aa12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 KCNK13Q9HB14 408 aa12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 NPDC1Q9NQX5 325 aaPredicted RBP12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 SPATA7Q9P0W8 599 aa12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 C19orf25Q9UFG5 118 aaPredicted RBP12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 R3HDM2Q9Y2K5 976 aaKnown RBP12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 MRFAP1Q9Y605 127 aa12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 SCN3AQ9NY46 2000 aa12.88□□□□□ -0.35
CTDSP1-210ENST00000491064 DNAJC13O75165 2243 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 FOXO6A8MYZ6 492 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 GOLGA6L19H0YKK7 550 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 PRMT5O14744 637 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 ZNF189O75820 626 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 NEURL1O76050 574 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 SP1P08047 785 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 CYC1P08574 325 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 CTNNA1P35221 906 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 PPARGP37231 505 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 CCNFP41002 786 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 IST1P53990 364 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 SNRPNP63162 240 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 ACVR1Q04771 509 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 TFF3Q07654 80 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 FAM53BQ14153 422 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 P3H1Q32P28 736 aa12.87□□□□□ -0.35
CTDSP1-210ENST00000491064 FASTKD1Q53R41 847 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms