RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 BANPQ8N9N5 519 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 KDF1Q8NAX2 398 aaPredicted RBP16.72■□□□□ 0.27
ERCC3-207ENST00000490062 OR1L3Q8NH93 324 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 FGF11Q92914 225 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 NEIL2Q969S2 332 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 OR2A5Q96R48 311 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 PITHD1Q9GZP4 211 aaPredicted RBP16.72■□□□□ 0.27
ERCC3-207ENST00000490062 ARGLU1Q9NWB6 273 aaPredicted RBP16.72■□□□□ 0.27
ERCC3-207ENST00000490062 FOXJ2Q9P0K8 574 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 EMCNQ9ULC0 261 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 SH2B3Q9UQQ2 575 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 ACTL7BQ9Y614 415 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 AP1M2Q9Y6Q5 423 aa16.72■□□□□ 0.27
ERCC3-207ENST00000490062 ACACAQ13085 2346 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 MDC1Q14676 2089 aaKnown RBP16.71■□□□□ 0.27
ERCC3-207ENST00000490062 SDK2Q58EX2 2172 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 C1QTNF9BB2RNN3 333 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 H7BY64 318 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 K7EPI3 171 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 C1QTNF9P0C862 333 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 SPTBP11277 2137 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 GFAPP14136 432 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 EPORP19235 508 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 GDF5P43026 501 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 CCR8P51685 355 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 RPS15AP62244 130 aaKnown RBP16.71■□□□□ 0.27
ERCC3-207ENST00000490062 CASP8Q14790 479 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 TBCCQ15814 346 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 PFKFB4Q16877 469 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 C18orf21Q32NC0 220 aaPredicted RBP16.71■□□□□ 0.27
ERCC3-207ENST00000490062 CCDC153Q494R4 210 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 YOD1Q5VVQ6 348 aaPredicted RBP16.71■□□□□ 0.27
ERCC3-207ENST00000490062 TLDC1Q6P9B6 456 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 FOXR1Q6PIV2 292 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 NXPE4Q6UWF7 544 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 SLCO4C1Q6ZQN7 724 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 SCYL1Q96KG9 808 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 PRAP1Q96NZ9 151 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 SSU72Q9NP77 194 aaKnown RBP16.71■□□□□ 0.27
ERCC3-207ENST00000490062 SSUH2Q9Y2M2 353 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 DYRK1BQ9Y463 629 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 ASB1Q9Y576 335 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 SEC16AO15027 2179 aa16.71■□□□□ 0.27
ERCC3-207ENST00000490062 TRBC2A0A5B9 178 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 FOXO6A8MYZ6 492 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 TMEM150CB9EJG8 249 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 COPEO14579 308 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 PLIN3O60664 434 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 SMIM24O75264 130 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 CDH1P12830 882 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 PIK3CGP48736 1102 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 AGTR2P50052 363 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 REEP5Q00765 189 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 PDK4Q16654 411 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 PRTGQ2VWP7 1150 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 CEP85LQ5SZL2 805 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 ATG9BQ674R7 924 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 PWWP2BQ6NUJ5 590 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 ZNF517Q6ZMY9 492 aaPredicted RBP16.7■□□□□ 0.26
ERCC3-207ENST00000490062 MDM1Q8TC05 714 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 RDH11Q8TC12 318 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 EXT2Q93063 718 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 APOPT1Q96IL0 206 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 SEC16BQ96JE7 1060 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 CTRCQ99895 268 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 FAM117AQ9C073 453 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 NT5DC2Q9H857 520 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 OPTCQ9UBM4 332 aa16.7■□□□□ 0.26
ERCC3-207ENST00000490062 A8MT66 165 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 E7EQ34 232 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 STMND1H3BQB6 276 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 E2F3O00716 465 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 TXNDC9O14530 226 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 HAT1O14929 419 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 RGS16O15492 202 aaPredicted RBP16.69■□□□□ 0.26
ERCC3-207ENST00000490062 TLX3O43711 291 aaPredicted RBP16.69■□□□□ 0.26
ERCC3-207ENST00000490062 NRP2O60462 931 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 WFS1O76024 890 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 STK17BO94768 372 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 TIAF1O95411 115 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 PROCP04070 461 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 RPS17P08708 135 aaKnown RBP16.69■□□□□ 0.26
ERCC3-207ENST00000490062 HBQ1P09105 142 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 C1GALT1C1LP0DN25 315 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 LIPCP11150 499 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 TAC1P20366 129 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 ATP5F1P24539 256 aaPredicted RBP16.69■□□□□ 0.26
ERCC3-207ENST00000490062 GSTM2P28161 218 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 GRK3P35626 688 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 PCBP4P57723 403 aaKnown RBP16.69■□□□□ 0.26
ERCC3-207ENST00000490062 MANEAQ5SRI9 462 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 CATSPEREQ5SY80 951 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 SLC22A9Q8IVM8 553 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 GPR135Q8IZ08 494 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 C4orf33Q8N1A6 199 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 PTGR2Q8N8N7 351 aaPredicted RBP16.69■□□□□ 0.26
ERCC3-207ENST00000490062 ESAMQ96AP7 390 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 CCDC126Q96EE4 140 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 SELENOSQ9BQE4 189 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 VIPAS39Q9H9C1 493 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms