RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 ILKQ13418 452 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 DOC2AQ14183 400 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 XKR6Q5GH73 641 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 SH2D4BQ5SQS7 431 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 KIAA1614Q5VZ46 1190 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 FAM47EQ6ZV65 393 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 PRSS42Q7Z5A4 293 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 MILR1Q7Z6M3 343 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 PLXDC1Q8IUK5 500 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 CLYBLQ8N0X4 340 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 RHBDD1Q8TEB9 315 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 UBE2E3Q969T4 207 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 ZUFSPQ96AP4 578 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 ZDHHC12Q96GR4 267 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 AHCYL2Q96HN2 611 aaKnown RBP12.85□□□□□ -0.35
TRAIP-210ENST00000489948 AIF1LQ9BQI0 150 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 PLCD4Q9BRC7 762 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 NSRP1Q9H0G5 558 aaKnown RBP12.85□□□□□ -0.35
TRAIP-210ENST00000489948 ABCG4Q9H172 646 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 SEMA6CQ9H3T2 930 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 ZNF395Q9H8N7 513 aaPredicted RBP12.85□□□□□ -0.35
TRAIP-210ENST00000489948 TNFRSF12AQ9NP84 129 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 C1GALT1Q9NS00 363 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 CUEDC1Q9NWM3 386 aaPredicted RBP12.85□□□□□ -0.35
TRAIP-210ENST00000489948 GEMIN8Q9NWZ8 242 aaKnown RBP12.85□□□□□ -0.35
TRAIP-210ENST00000489948 VTI1BQ9UEU0 232 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 ZDHHC2Q9UIJ5 367 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 PPT2Q9UMR5 302 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 SNX7Q9UNH6 387 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 UNC13CQ8NB66 2214 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 SERTM1A2A2V5 107 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 CPED1A4D0V7 1026 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 GMNCA6NCL1 334 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 NTN3O00634 580 aaPredicted RBP12.84□□□□□ -0.35
TRAIP-210ENST00000489948 CAPN5O15484 640 aaPredicted RBP12.84□□□□□ -0.35
TRAIP-210ENST00000489948 SH3BP5O60239 455 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 OR4F21O95013 312 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 CPNE6O95741 557 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 CAPN1P07384 714 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 VIMP08670 466 aaKnown RBP12.84□□□□□ -0.35
TRAIP-210ENST00000489948 ANKRD34CP0C6C1 535 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 MYF5P13349 255 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 ALDH4A1P30038 563 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 SERPINB1P30740 379 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 GRIA3P42263 894 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 INHBCP55103 352 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 PPP1CAP62136 330 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 CSNK1G2P78368 415 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 SLBPQ14493 270 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAIP-210ENST00000489948 UGT3A2Q3SY77 523 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 CATSPEREQ5SY80 951 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 STPG1Q5TH74 334 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 GLRX5Q86SX6 157 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 PAQR7Q86WK9 346 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 LAS2Q8IYD9 372 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 LRRC34Q8IZ02 419 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 KRT78Q8N1N4 520 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 USP7Q93009 1102 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 REPS1Q96D71 796 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 CDK15Q96Q40 435 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 CCT7Q99832 543 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 DPH7Q9BTV6 452 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 EPN3Q9H201 632 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 LRRN3Q9H3W5 708 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 FGFR1OP2Q9NVK5 253 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 PDP2Q9P2J9 529 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 RNF11Q9Y3C5 154 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 TRAF6Q9Y4K3 522 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 PCDHGA11Q9Y5H2 935 aa12.84□□□□□ -0.35
TRAIP-210ENST00000489948 A0A1W2PQM1 296 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 TRBC2A0A5B9 178 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 HDAC3O15379 428 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 CHEK2O96017 543 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 KRT6AP02538 564 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 KRT6BP04259 564 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 MAGP20916 626 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 VARSP26640 1264 aaKnown RBP12.83□□□□□ -0.36
TRAIP-210ENST00000489948 GRK3P35626 688 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 ARL1P40616 181 aaPredicted RBP12.83□□□□□ -0.36
TRAIP-210ENST00000489948 LSSP48449 732 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 KRT6CP48668 564 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 FOXA1P55317 472 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 GFERP55789 205 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 YBX1P67809 324 aaKnown RBP12.83□□□□□ -0.36
TRAIP-210ENST00000489948 CFHR1Q03591 330 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 IRGCQ6NXR0 463 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 MED27Q6P2C8 311 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 TMEM71Q6P5X7 295 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 RNF44Q7L0R7 432 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 TRIM73Q86UV7 250 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 KMT5CQ86Y97 462 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 WDR75Q8IWA0 830 aaKnown RBP12.83□□□□□ -0.36
TRAIP-210ENST00000489948 TBC1D19Q8N5T2 526 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 CDYL2Q8N8U2 506 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 DCBLD1Q8N8Z6 715 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 TTLQ8NG68 377 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 OR4D9Q8NGE8 314 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 WDR20Q8TBZ3 569 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 KCNA7Q96RP8 456 aa12.83□□□□□ -0.36
TRAIP-210ENST00000489948 PHOX2BQ99453 314 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms