RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 AMER3Q8N944 861 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 KCTD6Q8NC69 237 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 OR4K2Q8NGD2 314 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 OR5K2Q8NHB8 316 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 COPS8Q99627 209 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 OLFM1Q99784 485 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 KCNK13Q9HB14 408 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 C14orf105Q9NVL8 296 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 CIDEBQ9UHD4 219 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 FAM153AQ9UHL3 310 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 POLG2Q9UHN1 485 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 CBLCQ9ULV8 474 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 HEY1Q9Y5J3 304 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 A0A0J9YVX5 310 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 TFECO14948 347 aaPredicted RBP8.64□□□□□ -1.03
SSBP1-212ENST00000489378 NME2P1O60361 137 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 SRPX2O60687 465 aaPredicted RBP8.64□□□□□ -1.03
SSBP1-212ENST00000489378 SLC25A12O75746 678 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 SUN1O94901 812 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 AP2A1O95782 977 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 EPOP01588 193 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 EIF2S1P05198 315 aaKnown RBP8.64□□□□□ -1.03
SSBP1-212ENST00000489378 EPXP11678 715 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 GZMAP12544 262 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 NME2P22392 152 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 PRKCIP41743 596 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 CDKN1CP49918 316 aaPredicted RBP8.64□□□□□ -1.03
SSBP1-212ENST00000489378 DCAF7P61962 342 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 BRD3Q15059 726 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 PCBP2Q15366 365 aaKnown RBP eCLIP8.64□□□□□ -1.03
SSBP1-212ENST00000489378 SLC1A5Q15758 541 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 SYT16Q17RD7 645 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 OXLD1Q5BKU9 147 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 CMPK2Q5EBM0 449 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 PLAG1Q6DJT9 500 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 NPNTQ6UXI9 565 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 UNC5DQ6UXZ4 953 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 LANCL3Q6ZV70 420 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 ACAD11Q709F0 780 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 ZNF571Q7Z3V5 609 aaPredicted RBP8.64□□□□□ -1.03
SSBP1-212ENST00000489378 SIMC1Q8NDZ2 872 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 OR10Q1Q8NGQ4 319 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 OXNAD1Q96HP4 312 aaPredicted RBP8.64□□□□□ -1.03
SSBP1-212ENST00000489378 IL17FQ96PD4 163 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 MENTQ9BUN1 341 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 TGIF2Q9GZN2 237 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 LUC7LQ9NQ29 371 aaKnown RBP8.64□□□□□ -1.03
SSBP1-212ENST00000489378 INTS7Q9NVH2 962 aaKnown RBP8.64□□□□□ -1.03
SSBP1-212ENST00000489378 TRPS1Q9UHF7 1281 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 ANAPC7Q9UJX3 599 aa8.64□□□□□ -1.03
SSBP1-212ENST00000489378 IGLV3-16A0A075B6K0 115 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 A0A0G2JNJ9 132 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 CCL22O00626 93 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 HS6ST1O60243 411 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 PDE9AO76083 593 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 CCDC172P0C7W6 258 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 PRSS56P0CW18 603 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 C8orf89P0DMQ9 161 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 MYBL1P10243 752 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 CD53P19397 219 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 TFEBP19484 476 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 NFKB1P19838 968 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 PTPN3P26045 913 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 GDF10P55107 478 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 TAS2R40P59535 323 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 PDK2Q15119 407 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 SF1Q15637 639 aaKnown RBP8.63□□□□□ -1.03
SSBP1-212ENST00000489378 HADHQ16836 314 aaKnown RBP8.63□□□□□ -1.03
SSBP1-212ENST00000489378 MUM1Q2TAK8 710 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 PRTGQ2VWP7 1150 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 TEX44Q53QW1 395 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 Q5PR19 223 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 CDKAL1Q5VV42 579 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 C16orf47Q6ZP98 133 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-212ENST00000489378 ZNF227Q86WZ6 799 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 SHISA5Q8N114 240 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 IPMKQ8NFU5 416 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 OR5M3Q8NGP4 307 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 ULK4Q96C45 1275 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 CABS1Q96KC9 395 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 TEKT5Q96M29 485 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 RNF157Q96PX1 679 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 HAUS4Q9H6D7 363 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 PLEKHF2Q9H8W4 249 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 VPS37BQ9H9H4 285 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 BEX4Q9NWD9 120 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-212ENST00000489378 ZDHHC3Q9NYG2 299 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 Q9UFV3 132 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 IP6K2Q9UHH9 426 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 ALG6Q9Y672 507 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 FAM169AQ9Y6X4 670 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 PRMT3O60678 531 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 GLI4P10075 376 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 ARAFP10398 606 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 CD9P21926 228 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 SLC26A3P40879 764 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 MAT1AQ00266 395 aaKnown RBP8.63□□□□□ -1.03
SSBP1-212ENST00000489378 PDK1Q15118 436 aa8.63□□□□□ -1.03
SSBP1-212ENST00000489378 TAF1AQ15573 450 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-212ENST00000489378 FLYWCH1Q4VC44 716 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms