RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 LRRC8BQ6P9F7 803 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 SUSD1Q6UWL2 747 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 PEX26Q7Z412 305 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 LRRC6Q86X45 466 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 ARHGEF39Q8N4T4 335 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 TUBB6Q9BUF5 446 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 MRPS30Q9NP92 439 aaKnown RBP18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 CHRAC1Q9NRG0 131 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 STMN3Q9NZ72 180 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 MKL2Q9ULH7 1088 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 CELSR1Q9NYQ6 3014 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 POLQO75417 2590 aa18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 A0A0A6YYC8 382 aaPredicted RBP18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 I3L1I5 382 aaPredicted RBP18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 KRT38O76015 456 aa18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 IFNB1P01574 187 aa18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 MYBL2P10244 700 aa18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 STIP1P31948 543 aaKnown RBP18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 EIF3BP55884 814 aaKnown RBP18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 OASLQ15646 514 aaKnown RBP18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 LONRF1Q17RB8 773 aa18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 CTSL3PQ5NE16 218 aa18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 GARNL3Q5VVW2 1013 aa18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 PRUNE1Q86TP1 453 aa18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 OR2A5Q96R48 311 aa18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 PANX2Q96RD6 677 aa18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 RAB6BQ9NRW1 208 aa18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 TINAGQ9UJW2 476 aa18.43■□□□□ 0.54
SMPDL3A-202ENST00000487215 MIF4GDA9UHW6 222 aaKnown RBP18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 C19orf84I3L1E1 186 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 NDUFS3O75489 264 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 MATN4O95460 622 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 C8orf89P0DMQ9 161 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 RPA3P35244 121 aaPredicted RBP18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 MAT1AQ00266 395 aaKnown RBP18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 GBX1Q14549 363 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 CDSNQ15517 529 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 ZNF766Q5HY98 468 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 PCID2Q5JVF3 399 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 ZNF425Q6IV72 752 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 MPP5Q8N3R9 675 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 ACRBPQ8NEB7 543 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 OR9A1PQ8NGU1 263 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 SMPDL3AQ92484 453 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 DRC3Q9H069 523 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 IGSF5Q9NSI5 407 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 TREX1Q9NSU2 369 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 TEKT2Q9UIF3 430 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 DCHS2Q6V1P9 2916 aa18.42■□□□□ 0.54
SMPDL3A-202ENST00000487215 IGHV3-20A0A0C4DH32 117 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 A8MUI8 341 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 ARHGEF33A8MVX0 844 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 P2RX6O15547 441 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 LIASO43766 372 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 SEC24DO94855 1032 aaPredicted RBP18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 FTCDO95954 541 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 APRTP07741 180 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 ESRRAP11474 423 aaPredicted RBP18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 ETS1P14921 441 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 AGAP20933 346 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 ATP5DP30049 168 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 SMSP52788 366 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 TSTA3Q13630 321 aaPredicted RBP18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 ANKRD20A4Q4UJ75 823 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 RAD9BQ6WBX8 426 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 RERGQ96A58 199 aaPredicted RBP18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 BIRC8Q96P09 236 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 TAC3Q9UHF0 121 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 PCYOX1Q9UHG3 505 aa18.41■□□□□ 0.54
SMPDL3A-202ENST00000487215 MYO1CO00159 1063 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 NIPSNAP2O75323 286 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 EZRP15311 586 aaKnown RBP18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 SSTR2P30874 369 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 SESN2P58004 480 aaPredicted RBP18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 SNRPNP63162 240 aaKnown RBP18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 CRADDP78560 199 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 ICE2Q659A1 982 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 FCRLBQ6BAA4 426 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 LANCL3Q6ZV70 420 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 BEST3Q8N1M1 668 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 ADAMTS18Q8TE60 1221 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 METTL21AQ8WXB1 218 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 FAM136AQ96C01 138 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 MTFMTQ96DP5 389 aaKnown RBP18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 MAGED4Q96JG8 741 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 GPR137Q96N19 417 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 VN1R1Q9GZP7 353 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 ZNF835Q9Y2P0 537 aa18.4■□□□□ 0.54
SMPDL3A-202ENST00000487215 PKDREJQ9NTG1 2253 aa18.39■□□□□ 0.54
SMPDL3A-202ENST00000487215 FAM227AF5H4B4 570 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 PKMP14618 531 aaKnown RBP18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 NMBRP28336 390 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 FMO4P31512 558 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 KRTAP10-9P60411 292 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 PRDX1Q06830 199 aaKnown RBP18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 FAM53BQ14153 422 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 ARHGAP19Q14CB8 494 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 BTBD16Q32M84 506 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 PLAG1Q6DJT9 500 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms