RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 BMPR1AP36894 532 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 CLCN4P51793 760 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 AQP4P55087 323 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 GANABQ14697 944 aaKnown RBP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 LIN52Q52LA3 116 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 UBAP2Q5T6F2 1119 aaKnown RBP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 FRRS1Q6ZNA5 592 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 KBTBD6Q86V97 674 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 LAPTM4BQ86VI4 370 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 SLC5A11Q8WWX8 675 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 NCSTNQ92542 709 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 PEX13Q92968 403 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 EFHD2Q96C19 240 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 LRIG1Q96JA1 1093 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 TBL1XR1Q9BZK7 514 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 CLEC4AQ9UMR7 237 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 MAGP20916 626 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 DNAJB1P25685 340 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 CLDN10P78369 228 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 RAB33AQ14088 237 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 LIN54Q6MZP7 749 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 TMEM135Q86UB9 458 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 NATD1Q8N6N6 113 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 SAMD11Q96NU1 681 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 FCRL3Q96P31 734 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 ZNF347Q96SE7 839 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 CXorf21Q9HAI6 301 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 DLGAP4Q9Y2H0 992 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 PRSS51A0A1B0GVH4 220 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 H7BY64 318 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 H7C0S8 307 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 STX16O14662 325 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 CHST10O43529 356 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 TSPAN6O43657 245 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 B4GALT2O60909 372 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 ALDOAP04075 364 aaKnown RBP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 AGTR2P50052 363 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 PSMD7P51665 324 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 RPS13P62277 151 aaKnown RBP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 NTHL1P78549 312 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 EIF4HQ15056 248 aaKnown RBP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 KLHL24Q6TFL4 600 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 ABHD13Q7L211 337 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 RELL1Q8IUW5 271 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 DEFB119Q8N690 84 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 NPWQ8N729 165 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 S100ZQ8WXG8 99 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 SEC14L1Q92503 715 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 SMARCD2Q92925 531 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 ASB9Q96DX5 294 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 FAM210AQ96ND0 272 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 CAMK1GQ96NX5 476 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 PRAP1Q96NZ9 151 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 TPT1P8Q9HAU6 139 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 DMTF1Q9Y222 760 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 GPC6Q9Y625 555 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 SLC30A4O14863 429 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 KCNA5P22460 613 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 PIK3CBP42338 1070 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 CDK6Q00534 326 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 TMEM164Q5U3C3 297 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 CXorf57Q6NSI4 855 aaKnown RBP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 OXR1Q8N573 874 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 AVL9Q8NBF6 648 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 MS4A4AQ96JQ5 239 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 PKP4Q99569 1192 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 IFT27Q9BW83 186 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 MRM3Q9HC36 420 aaKnown RBP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 ABCB9Q9NP78 766 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 PNO1Q9NRX1 252 aaKnown RBP12.99□□□□□ -0.33
HDLBP-241ENST00000487169 UTS2RQ9UKP6 389 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 OAZ3Q9UMX2 235 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 LRRC42Q9Y546 428 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 PCDHB11Q9Y5F2 797 aa12.99□□□□□ -0.33
HDLBP-241ENST00000487169 UBE2QL1A1L167 161 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 TFECO14948 347 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-241ENST00000487169 PSIP1O75475 530 aaKnown RBP12.98□□□□□ -0.33
HDLBP-241ENST00000487169 AP2A2O94973 939 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 ARCN1P48444 511 aaKnown RBP12.98□□□□□ -0.33
HDLBP-241ENST00000487169 TCEAL5Q5H9L2 206 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 BTN2A1Q7KYR7 527 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 CD244Q9BZW8 370 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 SFXN1Q9H9B4 322 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 P2RX2Q9UBL9 471 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 PLAGL1Q9UM63 463 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 TMED5Q9Y3A6 229 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 MYH7P12883 1935 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 C9J4A7 227 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 E7ESA3 106 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 LOC110117498-PIK3R3F6TDL0 507 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 ARPC2O15144 300 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 IDH3BO43837 385 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 MPZL2O60487 215 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 RABL3Q5HYI8 236 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 SLC25A24Q6NUK1 477 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 TMEM25Q86YD3 366 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 LMX1AQ8TE12 382 aa12.98□□□□□ -0.33
HDLBP-241ENST00000487169 COPS4Q9BT78 406 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms