RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 KREMEN2Q8NCW0 462 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 OR2AP1Q8NGE2 309 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 WFIKKN2Q8TEU8 576 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 GAL3ST1Q99999 423 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 HTATIP2Q9BUP3 242 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 ALKBH4Q9NXW9 302 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 RNF11Q9Y3C5 154 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 ASB3Q9Y575 518 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 A0A1W2PPW3 197 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 PRAMEF11O60813 436 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 MTX2O75431 263 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 CSNK2A2P19784 350 aaPredicted RBP16■□□□□ 0.15
COL7A1-210ENST00000487017 CD72P21854 359 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 KCNA5P22460 613 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 PRKACGP22612 351 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 ARSFP54793 590 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 CBLBQ13191 982 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 KIAA1614Q5VZ46 1190 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 ZNF613Q6PF04 617 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 LINC00471Q8N535 108 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 ISOC1Q96CN7 298 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 TPT1P8Q9HAU6 139 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 AASSQ9UDR5 926 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 FOSL2P15408 326 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 PHC1P78364 1004 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 ARSIQ5FYB1 569 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 PAMR1Q6UXH9 720 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 CDHR3Q6ZTQ4 885 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 SH3RF2Q8TEC5 729 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 EFHD2Q96C19 240 aaPredicted RBP16■□□□□ 0.15
COL7A1-210ENST00000487017 JSRP1Q96MG2 331 aaPredicted RBP16■□□□□ 0.15
COL7A1-210ENST00000487017 XYLT2Q9H1B5 865 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 A0A0U1RQF3 1178 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 SDHDO14521 159 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 SMSP52788 366 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 ATP6AP1Q15904 470 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 SMU1Q2TAY7 513 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 VITQ6UXI7 678 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 ADGRG6Q86SQ4 1221 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 MARCH9Q86YJ5 346 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 RDH12Q96NR8 316 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 CD244Q9BZW8 370 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 YIPF1Q9Y548 306 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 OR14I1A6ND48 311 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 GBX2P52951 348 aaPredicted RBP16■□□□□ 0.15
COL7A1-210ENST00000487017 TXNL4AP83876 142 aaKnown RBP16■□□□□ 0.15
COL7A1-210ENST00000487017 SEMA3AQ14563 771 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 XKR5Q6UX68 686 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 CTU1Q7Z7A3 348 aaKnown RBP16■□□□□ 0.15
COL7A1-210ENST00000487017 EIF3KQ9UBQ5 218 aaKnown RBP16■□□□□ 0.15
COL7A1-210ENST00000487017 ADAMTS6Q9UKP5 1117 aa16■□□□□ 0.15
COL7A1-210ENST00000487017 A0A0G2JN53 185 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 M0QX08 132 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 DIRAS1O95057 198 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 ZNF404Q494X3 552 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 BRAT1Q6PJG6 821 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 OR8H3Q8N146 312 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 CNDP2Q96KP4 475 aaKnown RBP15.99■□□□□ 0.15
COL7A1-210ENST00000487017 YIPF4Q9BSR8 244 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 NSUN3Q9H649 340 aaKnown RBP15.99■□□□□ 0.15
COL7A1-210ENST00000487017 VRTNQ9H8Y1 702 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 PREBQ9HCU5 417 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 MKKSQ9NPJ1 570 aaPredicted RBP15.99■□□□□ 0.15
COL7A1-210ENST00000487017 RNF6Q9Y252 685 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 WRBO00258 174 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 PIRO00625 290 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 CHRM1P11229 460 aaPredicted RBP15.99■□□□□ 0.15
COL7A1-210ENST00000487017 GNALP38405 381 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 MASP1P48740 699 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 MINDY4Q4G0A6 757 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 AQP11Q8NBQ7 271 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 DENND1AQ8TEH3 1009 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 LGR4Q9BXB1 951 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 MYH2Q9UKX2 1941 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 NALCNQ8IZF0 1738 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 H0YAE9 185 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 SETD6Q8TBK2 473 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 NCSTNQ92542 709 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 CCDC115Q96NT0 180 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 TSGA13Q96PP4 275 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 ELAC1Q9H777 363 aaKnown RBP15.99■□□□□ 0.15
COL7A1-210ENST00000487017 MED31Q9Y3C7 131 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 PCDHGB1Q9Y5G3 927 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 ITGB1P05556 798 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 VIPR1P32241 457 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 BDKRB1P46663 353 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 WDTC1Q8N5D0 677 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 OR10Q1Q8NGQ4 319 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 C17orf50Q8WW18 174 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 HDAC2Q92769 488 aaKnown RBP15.99■□□□□ 0.15
COL7A1-210ENST00000487017 KCNJ9Q92806 393 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 TMEM203Q969S6 136 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 MNTQ99583 582 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 CRTAC1Q9NQ79 661 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 MARK1Q9P0L2 795 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 CD2P06729 351 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 PROZP22891 400 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 ARCN1P48444 511 aaKnown RBP15.99■□□□□ 0.15
COL7A1-210ENST00000487017 NANOGP8Q6NSW7 305 aa15.99■□□□□ 0.15
COL7A1-210ENST00000487017 NPAS3Q8IXF0 933 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms