RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 MAN1B1Q9UKM7 699 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 SATB2Q9UPW6 733 aa3.97□□□□□ -1.77
SNRNP40-205ENST00000486941 RP1L1Q8IWN7 2480 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 A0A0D9SEW6 157 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 A0A1W2PNU3 283 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 CPED1A4D0V7 1026 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 GTPBP10A4D1E9 387 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 LMO7DNF2Z398 122 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 TMX2-CTNND1H3BSU7 103 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 I6L893 689 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 K7ENP7 123 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 RNF103O00237 685 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 FPGTO14772 594 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 RAD51BO15315 384 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 PRPF4O43172 522 aaKnown RBP eCLIP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 AQP9O43315 295 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 ZMPSTE24O75844 475 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 INMTO95050 263 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 SCGB1D2O95969 90 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 OR1E1P30953 314 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 KRT9P35527 623 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 USP8P40818 1118 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 GABRB2P47870 512 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 SERPINH1P50454 418 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 PFN3P60673 137 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 GNA12Q03113 381 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 PDE1CQ14123 709 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 KEAP1Q14145 624 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 MORC3Q14149 939 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 LY6DQ14210 128 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 PTK2BQ14289 1009 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 GRM3Q14832 879 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 CDKN3Q16667 212 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 ARL13BQ3SXY8 428 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 SLC25A52Q3SY17 297 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 INO80DQ53TQ3 878 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 ZNF542PQ5EBM4 170 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 CARD16Q5EG05 197 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 OTUD1Q5VV17 481 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 ISM2Q6H9L7 571 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 KLHL10Q6JEL2 608 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 GUSBP11Q6P575 273 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 C22orf39Q6P5X5 142 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 INO80CQ6PI98 192 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 TRIM65Q6PJ69 517 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 LINGO4Q6UY18 593 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 GBP6Q6ZN66 633 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 FAM183BPQ6ZVS7 135 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 EFL1Q7Z2Z2 1120 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 PTAR1Q7Z6K3 402 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 LAS2Q8IYD9 372 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 FBXL14Q8N1E6 418 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 SDR16C5Q8N3Y7 309 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 ARL14Q8N4G2 192 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 IQCF1Q8N6M8 205 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 EXD3Q8N9H8 876 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 DENND6BQ8NEG7 585 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 SHC3Q92529 594 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 NAT6Q93015 286 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 ISG20Q96AZ6 181 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 CENPTQ96BT3 561 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 ARHGEF26Q96DR7 871 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 ATXN7L3BQ96GX2 97 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 URB1-AS1Q96HZ7 61 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 KLF6Q99612 283 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 IL12RB2Q99665 862 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 WDR83Q9BRX9 315 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 CRACR2AQ9BSW2 395 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 CLMPQ9H6B4 373 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 SPAG4Q9NPE6 437 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 MPP6Q9NZW5 540 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 SPASTQ9UBP0 616 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 STAP1Q9ULZ2 295 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 FADS3Q9Y5Q0 445 aa3.96□□□□□ -1.78
SNRNP40-205ENST00000486941 ANKRD36A6QL64 1941 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 LRP4O75096 1905 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 IGLON5A6NGN9 336 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 TMEM110-MUSTN1A8MSY1 372 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 NTN3O00634 580 aaPredicted RBP3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 AREL1O15033 823 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 KRT86O43790 486 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 TNFSF15O95150 251 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 POP4O95707 220 aaKnown RBP3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 CD160O95971 181 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 GSRP00390 522 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 ANXA6P08133 673 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 ITGA2BP08514 1039 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 PON1P27169 355 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 PEX2P28328 305 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 CDH5P33151 784 aaPredicted RBP3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 SULT1E1P49888 294 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 CSRP3P50461 194 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 BLKP51451 505 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 DNA2P51530 1060 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 CCNHP51946 323 aaPredicted RBP3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 DGKQP52824 942 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 THOP1P52888 689 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 STX17P56962 302 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 GEMIN4P57678 1058 aaKnown RBP3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 SNRPD1P62314 119 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms