RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 MTHFD1P11586 935 aaKnown RBP11.21□□□□□ -0.61
PRKCB-207ENST00000486868 SDC1P18827 310 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 PTX3P26022 381 aaPredicted RBP11.21□□□□□ -0.61
PRKCB-207ENST00000486868 HTR1EP28566 365 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 CD6P30203 668 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 S100A3P33764 101 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 RPL3P39023 403 aaKnown RBP11.21□□□□□ -0.61
PRKCB-207ENST00000486868 VHLP40337 213 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 TRPC1P48995 793 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 CCR8P51685 355 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 ARFIP1P53367 373 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 REEP5Q00765 189 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 MS4A2Q01362 244 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 PRDX1Q06830 199 aaKnown RBP11.21□□□□□ -0.61
PRKCB-207ENST00000486868 FZD5Q13467 585 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 PTGR1Q14914 329 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 CCDC85BQ15834 202 aaPredicted RBP11.21□□□□□ -0.61
PRKCB-207ENST00000486868 RPE65Q16518 533 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 TIGD2Q4W5G0 525 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 LRIF1Q5T3J3 769 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 ENPP7Q6UWV6 458 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 TMIGD1Q6UXZ0 262 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 DHDDSQ86SQ9 333 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 FAM124AQ86V42 546 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 ADHFE1Q8IWW8 467 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 TSTD1Q8NFU3 115 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 TTLQ8NG68 377 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 OR8J2Q8NGG1 315 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 HMGB4Q8WW32 186 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 OR1E3Q8WZA6 343 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 GTF2H4Q92759 462 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 VPS33AQ96AX1 596 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 APOLD1Q96LR9 279 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 CGREF1Q99674 301 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 IER2Q9BTL4 223 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 KCNH6Q9H252 994 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 FZD3Q9NPG1 666 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 DMRT3Q9NQL9 472 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 CMTM6Q9NX76 183 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 AHSPQ9NZD4 102 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 C6orf203Q9P0P8 240 aaPredicted RBP11.21□□□□□ -0.61
PRKCB-207ENST00000486868 ACTR3BQ9P1U1 418 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 KCNK6Q9Y257 313 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 DLGAP4Q9Y2H0 992 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 LRRC42Q9Y546 428 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 PCDHB11Q9Y5F2 797 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 GMEB1Q9Y692 573 aa11.21□□□□□ -0.61
PRKCB-207ENST00000486868 A0A096LPI6 279 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 TCRBV3S1A0A5B6 114 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 OR5K4A6NMS3 321 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 PDZK1P1A8MUH7 402 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 NME4O00746 187 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 CASQ2O14958 399 aaPredicted RBP11.2□□□□□ -0.62
PRKCB-207ENST00000486868 PRICKLE3O43900 615 aaPredicted RBP11.2□□□□□ -0.62
PRKCB-207ENST00000486868 ANP32DO95626 131 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 IGHV4-34P06331 123 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 FOSL2P15408 326 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 TIA1P31483 386 aaKnown RBP eCLIP11.2□□□□□ -0.62
PRKCB-207ENST00000486868 PTDSS1P48651 473 aaKnown RBP11.2□□□□□ -0.62
PRKCB-207ENST00000486868 SRP54P61011 504 aaKnown RBP11.2□□□□□ -0.62
PRKCB-207ENST00000486868 RHDQ02161 417 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 CLCA4Q14CN2 919 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 MAPKAPK3Q16644 382 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 FAM174BQ3ZCQ3 159 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 AASDHQ4L235 1098 aaPredicted RBP11.2□□□□□ -0.62
PRKCB-207ENST00000486868 CATSPEREQ5SY80 951 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 THEMIS2Q5TEJ8 643 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 LCN8Q6JVE9 175 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 NANOGP8Q6NSW7 305 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 LAYNQ6UX15 382 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 PROSER1Q86XN7 944 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 METTL4Q8N3J2 472 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 NATD1Q8N6N6 113 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 TNIP2Q8NFZ5 429 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 SLC26A7Q8TE54 656 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 SH3KBP1Q96B97 665 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 MTERF3Q96E29 417 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 TOE1Q96GM8 510 aaKnown RBP11.2□□□□□ -0.62
PRKCB-207ENST00000486868 ITCHQ96J02 903 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 PRPF18Q99633 342 aaKnown RBP11.2□□□□□ -0.62
PRKCB-207ENST00000486868 VCX3BQ9H321 246 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 OSGEPL1Q9H4B0 414 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 NANOGQ9H9S0 305 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 FAM120CQ9NX05 1096 aaKnown RBP11.2□□□□□ -0.62
PRKCB-207ENST00000486868 OR6C2Q9NZP2 312 aa11.2□□□□□ -0.62
PRKCB-207ENST00000486868 TDRKHQ9Y2W6 561 aaKnown RBP11.2□□□□□ -0.62
PRKCB-207ENST00000486868 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.2□□□□□ -0.62
PRKCB-207ENST00000486868 LAMA3Q16787 3333 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 TRBV5-3A0A0A0MS03 114 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 A0A1W2PPC4 97 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 FAM221BA6H8Z2 402 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 A6NCN8 305 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 H0Y3Z8 333 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 H3BNX3 289 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 PEX1O43933 1283 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 SORBS2O94875 1100 aaKnown RBP11.19□□□□□ -0.62
PRKCB-207ENST00000486868 TNFP01375 233 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 CAPNS1P04632 268 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 UMPSP11172 480 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 PCNAP12004 261 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms